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scnpilot_p_inoc_scaffold_314_60

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(56797..57483)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family protein id=2590187 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 424
  • Evalue 8.10e-116
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:ESW61292.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 228.0
  • Bit_score: 424
  • Evalue 1.10e-115
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 228.0
  • Bit_score: 415
  • Evalue 8.20e-114

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Taxonomy

Rhodobacter sp. CACIA14H1 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGCAACGCTGCGCAAAATTCTTCTGGTCGACGACGACGACGATCTGCGCGAGGCGCTGAGCGAACAGCTTGTGATGACCGAGGATTTCGATGTTTTCGAAGCCTCTACCGGCCTCGAAGGTCTGGAGAAAGCCAAGGGCGGCGGGCATGATCTGGTGATCCTCGACGTCGGCCTGCCTGATACGGACGGGCGCGAACTGTGCCGCCGGATGCGCAAGGCGGGCGTGAAATGCCCGATCATGATGCTTACCGGACACGATACCGATGCCGATACGATCCTCGGGCTTGATTCGGGCGCCAATGACTATGTGACCAAGCCGTTCAAATTTCCTGTACTGCTGGCCCGCATCCGGGCACAGTTGCGGCAGCACGAACAATCCGAAGATGCGGTGTTCCAGCTTGGCCCCTATACGTTCAAACCGGCCCAGAAGCTTCTGGTGGACGAAAAGGAACGCAAGGTTCGCCTGACCGAGAAGGAAACCAATATCCTGAAGTACCTTTACCGCGCGCAACAAGGTGTTGTGGCTCGGGATGTGCTTCTCCACGAAGTCTGGGGTTATAACGCGGGGGTTACCACCCACACACTTGAAACCCACATCTATCGTCTGCGCCAGAAGATCGAGCCGGACCCCTCCAATGCACGTCTGCTGGTGACCGAATCCGGCGGATATCGGCTGGTCGCTTGA
PROTEIN sequence
Length: 229
MATLRKILLVDDDDDLREALSEQLVMTEDFDVFEASTGLEGLEKAKGGGHDLVILDVGLPDTDGRELCRRMRKAGVKCPIMMLTGHDTDADTILGLDSGANDYVTKPFKFPVLLARIRAQLRQHEQSEDAVFQLGPYTFKPAQKLLVDEKERKVRLTEKETNILKYLYRAQQGVVARDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLVTESGGYRLVA*