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scnpilot_p_inoc_scaffold_391_27

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(41643..42752)

Top 3 Functional Annotations

Value Algorithm Source
Phytanoyl-CoA dioxygenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CB91_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 369.0
  • Bit_score: 641
  • Evalue 4.00e-181
  • rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EYR84405.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 369.0
  • Bit_score: 641
  • Evalue 5.60e-181
Phytanoyl-CoA dioxygenase similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 379.0
  • Bit_score: 418
  • Evalue 2.70e-114

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGAAGGACTTCGTATCCGGCATCAGCCTTGAGGCGTTTCGCGCTGAAGCCGAAACCACGACGACGCCGGCAATGTGCCCTTCGGCCATGGTCATCGAAAAGAACATCCCGATCTATGACGGGGCCAGCGTAACCGAGGCGATTGCGCCGGAATGGGCGGGAGTCATCGGGCAGGGGCCGGGCGTCTTTGTCATCAAGCGCGCCTTCGCCGATCTGGGCGCCATCGACCGCGCCAGCGACGCCTTCCGCGCCATCATCGCGCAGGAGCGGGCGGAAGGGATTGCAGCGGGGGATCATTTCGCCAAGGCGGGTGCGAATGACCGGATCTGGAACAGCCTGCAAAAGCTGTGTCTGCATGATCCGGCGGTCTATGCGCGCTATATGGCCAATCCGGTGATCGACATTGCCTGCCGCGCCTGGCTTGGCCCCGGCTATCAGCTGGCGACCCAGGTCAATCAGGTGCGTCCCGGTGGCAAGGCACAGGCGCCGCACCGCGACTATCATCTGGGTTTCATGTCGCCCGACCAGATGGCGCAGTACCCCGATCACATCCATGCCACGGGGCCGACGCTGATCCTGCAAGGCGGCGTGGCGCATTGCGACATGCCGGTGGAAAGCGGCACGACCAAGCTTCTGCCTCATTCGCAGCGCTACCTGCATGGCTATATCGCCGCGACCCGCCCCGAGTTCCGCGATTATTTCGAGGCGCATCACGTCCAGTTGCCTCTGGAAAAGGGCGATGCGATCTTCTTCAGCCCGGCGCTGTTCCATGCGGCGGGCGAGAACCGGACGGCCGATGTGGTGCGGATGGTGAACCTGATCCAGACCGCCTCGGCCTTCGCGCGGCATATGGAAAACCTTGACCGCACCGCGATGGTGCGCGCGGTCTACCCGCATCTGGCCGCGCTTTCACCCGAGGGGCGGCGCGCCGTCATCGCGGCGACGGCGGACGGCTATCCTTTCCCGACCAATCTGGACACCGATCCGCCGATCGGGGGGCTTGCTCCCGAAAGTCAGCAGGATCTGCTGGCCCGAGCGGTTGCTGAAGGGTGGGATCAGGCGCGGCTGGAGACCGCGCTGGAGGAACAGGCCCGCAAACGCCGGGCCTGA
PROTEIN sequence
Length: 370
MKDFVSGISLEAFRAEAETTTTPAMCPSAMVIEKNIPIYDGASVTEAIAPEWAGVIGQGPGVFVIKRAFADLGAIDRASDAFRAIIAQERAEGIAAGDHFAKAGANDRIWNSLQKLCLHDPAVYARYMANPVIDIACRAWLGPGYQLATQVNQVRPGGKAQAPHRDYHLGFMSPDQMAQYPDHIHATGPTLILQGGVAHCDMPVESGTTKLLPHSQRYLHGYIAATRPEFRDYFEAHHVQLPLEKGDAIFFSPALFHAAGENRTADVVRMVNLIQTASAFARHMENLDRTAMVRAVYPHLAALSPEGRRAVIAATADGYPFPTNLDTDPPIGGLAPESQQDLLARAVAEGWDQARLETALEEQARKRRA*