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scnpilot_p_inoc_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_391_1
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..4536
DNA (4536bp) protein (1512aa)
Amino acid adenylation enzyme/thioester reductase family protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GJ90_METAL
Amino acid adenylation enzyme/thioester reductase family protein {ECO:0000313|EMBL:EIC29080.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae;
amino acid adenylation domain-containing protein
scnpilot_p_inoc_scaffold_391_2
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4533..8582
DNA (4050bp) protein (1350aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000377DDBD rbh
non-ribosomal peptide synthetase
Putative non-ribosomal peptide synthetase {ECO:0000313|EMBL:CAK15504.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
scnpilot_p_inoc_scaffold_391_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8579..16885
DNA (8307bp) protein (2769aa)
Amino acid adenylation enzyme/thioester reductase family protein n=1 Tax=Pseudomonas sp. GM25 RepID=J2X6U7_9PSED rbh
Thioester reductase {ECO:0000313|EMBL:KIF57671.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;
amino acid adenylation domain-containing protein rbh
scnpilot_p_inoc_scaffold_391_4
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16882..18150
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003635F07 rbh
Methyltransferase {ECO:0000313|EMBL:CBA11559.1}; TaxID=47763 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus.;"
Methyltransferase
scnpilot_p_inoc_scaffold_391_5
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18147..18818
DNA (672bp) protein (224aa)
4'-phosphopantetheinyl transferase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXD8_9RHOB
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:EEW26663.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodoba
enterobactin synthase
scnpilot_p_inoc_scaffold_391_6
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18815..20416
DNA (1602bp) protein (534aa)
Cyclic peptide transporter n=1 Tax=Pseudomonas sp. GM50 RepID=J3ABC4_9PSED rbh
cyclic peptide transporter family protein rbh
Cyclic peptide transporter family protein {ECO:0000313|EMBL:KGC10197.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomalle
scnpilot_p_inoc_scaffold_391_7
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20416..21147
DNA (732bp) protein (244aa)
Thioesterase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LRQ6_BURGS
thioesterase
Thioesterase {ECO:0000313|EMBL:AEA65550.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain
scnpilot_p_inoc_scaffold_391_8
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21144..22529
DNA (1386bp) protein (462aa)
amidase n=1 Tax=Methyloversatilis universalis RepID=UPI0003792C68 rbh
Putative amidase {ECO:0000313|EMBL:EGK70959.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis unive
amidase
scnpilot_p_inoc_scaffold_391_9
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22531..22728
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IHA8_9PSEU
mbtH-like family protein
MbtH-like family protein {ECO:0000313|EMBL:KGC09177.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
scnpilot_p_inoc_scaffold_391_10
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22850..24529
DNA (1680bp) protein (560aa)
Alcohol dehydrogenase (Acceptor) n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2GJV6_9RHOB rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:KGM47226.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oc
glucose-methanol-choline oxidoreductase
scnpilot_p_inoc_scaffold_391_11
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24526..26139
DNA (1614bp) protein (538aa)
Medium-chain-fatty-acid--CoA ligase n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2I2I2_9RHOB rbh
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGM47225.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanico
AMP-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_391_12
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26152..26595)
DNA (444bp) protein (148aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SN10_9RHOB
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:EPX87829.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;"
Rrf2 family transcriptional regulator
scnpilot_p_inoc_scaffold_391_13
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26694..27713
DNA (1020bp) protein (340aa)
2-nitropropane dioxygenase n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JSX7_9RHOB
2-nitropropane dioxygenase {ECO:0000313|EMBL:EKE68220.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter
2-nitropropane dioxygenase
scnpilot_p_inoc_scaffold_391_14
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27710..28369
DNA (660bp) protein (220aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JCA6_9RHOB
5-formyltetrahydrofolate cyclo-ligase
scnpilot_p_inoc_scaffold_391_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28559..30127)
DNA (1569bp) protein (523aa)
D-aminopeptidase (EC:3.4.11.19)
Beta-lactamase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S549_9RHOB rbh
Beta-lactamase {ECO:0000313|EMBL:EEW23914.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
scnpilot_p_inoc_scaffold_391_16
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30135..30650)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S550_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW23915.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
hypothetical protein
scnpilot_p_inoc_scaffold_391_17
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30664..31641)
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Rhodobacter sp. SW2 RepID=C8S551_9RHOB rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EEW23916.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacte
putative oligopeptide ABC transporter, ATP-binding protein
scnpilot_p_inoc_scaffold_391_18
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31638..32633)
DNA (996bp) protein (332aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036DBB1B rbh
putative peptide ABC transporter ATP-binding protein y4tR
Putative peptide ABC transporter ATP-binding protein y4tR {ECO:0000313|EMBL:AHK47627.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/
scnpilot_p_inoc_scaffold_391_19
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32637..33524)
DNA (888bp) protein (296aa)
Dipeptide transport system permease protein dppC n=3 Tax=Ochrobactrum RepID=C4WPT8_9RHIZ rbh
Dipeptide transport system permease protein dppC {ECO:0000313|EMBL:EEQ94281.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="
putative permease component of ABC transporter rbh
scnpilot_p_inoc_scaffold_391_20
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33524..34459)
DNA (936bp) protein (312aa)
glutathione ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003689542 rbh
Glutathione ABC transporter permease {ECO:0000313|EMBL:ERI11987.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactru
dppB; dipeptide ABC transport system permease protein DppB rbh
scnpilot_p_inoc_scaffold_391_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34564..36147)
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036B010B rbh
Glutathione-binding protein gsiB {ECO:0000313|EMBL:EEQ94283.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum int
dppA; periplasmic dipeptide ABC transport protein precursor DppA rbh
scnpilot_p_inoc_scaffold_391_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36267..37652)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037807E6 rbh
diaminopimelate decarboxylase rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
scnpilot_p_inoc_scaffold_391_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37701..38633
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037FF66E rbh
putative transcriptional regulatory protein, LysR family rbh
Putative transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:AHK47621.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/E
scnpilot_p_inoc_scaffold_391_24

Not on your lists

comp(38654..39433)
DNA (780bp) protein (260aa)
sugar ABC transporter ATP-binding protein (EC:3.6.3.17) rbh
ABC transporter ATP-binding protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036D82A8 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18304.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_391_25

Not on your lists

comp(39433..40554)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G546_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18305.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
inner-membrane translocator
scnpilot_p_inoc_scaffold_391_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40637..41581)
DNA (945bp) protein (315aa)
Periplasmic-binding protein/LacI transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR54_9RHIZ rbh
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:EYR84406.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sh
sugar ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_391_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41643..42752)
DNA (1110bp) protein (370aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CB91_9RHIZ rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EYR84405.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phytanoyl-CoA dioxygenase
scnpilot_p_inoc_scaffold_391_28
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42945..44099)
DNA (1155bp) protein (385aa)
oxidoreductase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F122 rbh
Oxidoreductase {ECO:0000313|EMBL:KEA08007.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrob
oxidoreductase
scnpilot_p_inoc_scaffold_391_29
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44096..45160)
DNA (1065bp) protein (355aa)
AP endonuclease n=1 Tax=Paracoccus sp. N5 RepID=UPI0003744DF1 rbh
AP endonuclease {ECO:0000313|EMBL:KGJ02830.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_391_30
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45162..45974)
DNA (813bp) protein (271aa)
short-chain dehydrogenase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F120 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ10825.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutu
putative oxidoreductase
Displaying items 1-30 of 62 in total

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