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scnpilot_p_inoc_scaffold_314_164

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 169589..169810

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRJ5_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 70.0
  • Bit_score: 110
  • Evalue 6.40e-22
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KHQ52743.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 1.50e-24
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 70.0
  • Bit_score: 110
  • Evalue 1.80e-22

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Taxonomy

Ponticoccus sp. UMTAT08 → Ponticoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
TTGTCTGAGGTGGAGATCGTGGTTCGACTGGACGTCATGCTCGCACGCCGCAAGATGCGCTCGCGCGAGCTGGCGGAAAGGATCGGGATTACCGAGGCCAATCTCAGCCTGCTGAAATCCGGCAAGGTAAAAGGTATCCGGTTCGAGACGCTGGCGGCGATCTGCGCGGTGCTGGACTGTCAGCCGGGTGACCTGCTGGAGGCCATCCCGCGCGAGAGCTGA
PROTEIN sequence
Length: 74
LSEVEIVVRLDVMLARRKMRSRELAERIGITEANLSLLKSGKVKGIRFETLAAICAVLDCQPGDLLEAIPRES*