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scnpilot_p_inoc_scaffold_706_2

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 146..820

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025575B0 similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 219.0
  • Bit_score: 151
  • Evalue 7.70e-34
LysR family transcriptional regulator {ECO:0000313|EMBL:KFE48182.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 219.0
  • Bit_score: 146
  • Evalue 4.50e-32
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 219.0
  • Bit_score: 144
  • Evalue 3.40e-32

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAACGCCATGGATGATGTTTCAGACCAGTTGAGGGGCTACAGGCTGGGCATGAAGGGCGAGCTGCGTCTTGCCATCACCGAAAGCACACTTTCCGATCACAAGAACCGCGTTTCGGAACATATCGCGCGCTTCAAAGCCCGCGCGCCAGATGTGCGGATCGAGTTGATCGTCCTGCCTCCCTCGGGTGTGCGTGCATCAATTCGCGACGGCAGGGCACATGTCGGTTTTTTACCTGCGCACTCCCGTGCTGACGATCTGGATTATCACGAGCTGCACAGAGAACGGATGTCGCTTTATTGCAGTCAGGGCCATCCGCTATTCGGGCGCATCTGTAACATGGAAGATATCTGTGCCGCCGAGATTGCATCGCCAGACTATCTGTTGAGCGACAGGCTCGGCGTTCATGGTGATAAGTTACGGATCGTCAGTCGGACAAACTCGATTGAAGGTATCGGCATCCTTGTCATGACGGGGAGCTATCTGGGGTTTCTGCCAGATCACCTCGCACTGCATTGGGTTCAGCAAGGCCAGCTGCAAGAATTGATGCCTGAGGTGTTCAGCTACCATATTCGCTTTTGTGCAATTGCACGTTCTGATCGCAAGGACAGCAGATTGATCCGGTCCTTTCTGCGCGAACTTTCCGGGCCCGGGCCTGAACTTCCCGATGGGTGA
PROTEIN sequence
Length: 225
MNAMDDVSDQLRGYRLGMKGELRLAITESTLSDHKNRVSEHIARFKARAPDVRIELIVLPPSGVRASIRDGRAHVGFLPAHSRADDLDYHELHRERMSLYCSQGHPLFGRICNMEDICAAEIASPDYLLSDRLGVHGDKLRIVSRTNSIEGIGILVMTGSYLGFLPDHLALHWVQQGQLQELMPEVFSYHIRFCAIARSDRKDSRLIRSFLRELSGPGPELPDG*