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scnpilot_p_inoc_scaffold_1024_13

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 12239..13132

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA id=2683374 bin=GWF1_Rhodobacteraceae_65_7 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 295.0
  • Bit_score: 544
  • Evalue 7.00e-152
  • rbh
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 295.0
  • Bit_score: 544
  • Evalue 9.90e-152
C32 tRNA thiolase similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 293.0
  • Bit_score: 508
  • Evalue 1.20e-141

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGCCGACGATCTGCATCTTTCCGACGACGATCTGGCGGAGGACATCCATCCGCTGTTTCATGGCGCCCCCGCGACCACAGAATTCCGCAAGCTCCGCAAGCGGCTGGTGCGCGAGGTGCGGGATGCCATCGACAAATACGGGATGATCGAACGCGGCACGCGCTGGCTGGTCTGTCTTTCCGGCGGAAAGGACAGCTATACCCTGCTTGCTGTCCTGCACGAACTGAAATGGCGCGGCCTCCTGCCGGTCGATCTGCTGGCCTGCAATCTGGATCAGGGTCAGCCGAATTTCCCGGCAACCGTCCTGCCGGACTTCCTGCAACGCATGGGCGTGCCGCATCGCATCGAATACCAGGACACCTATTCGGTGGTGATGGACAAGATCGGGCCGGGCAAGACCATGTGCTCGCTCTGCTCCCGGCTGCGGCGCGGCAATCTTTACCGCATTGCGCGGGAAGAGGGTTGCTCGGCCGTGGTGCTTGGCCATCACCGCGACGACATTCTGGAAACCTTCTTCATGAACCTGTTCCACGGCGGACGGCTGGCAACCATGCCACCCAAGCTGCTGAATGAGGAAGGCGATCTGTTCGTCTGTCGCCCGCTGGCTTTCGTGGCCGAGGCCGATTGCGAGAAATTCGCCCGCGCCATGAATTACCCGATCATTCCCTGCGATCTGTGCGGCAGCCAGGAAGGCTTGCAACGCCAGCAGGTCAAACAGTTGCTTGACGGATGGGAGGCCCGAAGCCCCGGCCGGCGGCAGGTGATGTTCCGCGCGCTGATGAATGCGCGACCGTCGCATCTGCTCGACCCTTCCATTTTCGATTTCACCGGGCTGACTGCGAAACCCGGAACATTTAGCGAAAATCCTCCGCATCTCGGACAGGAATTTTAA
PROTEIN sequence
Length: 298
MADDLHLSDDDLAEDIHPLFHGAPATTEFRKLRKRLVREVRDAIDKYGMIERGTRWLVCLSGGKDSYTLLAVLHELKWRGLLPVDLLACNLDQGQPNFPATVLPDFLQRMGVPHRIEYQDTYSVVMDKIGPGKTMCSLCSRLRRGNLYRIAREEGCSAVVLGHHRDDILETFFMNLFHGGRLATMPPKLLNEEGDLFVCRPLAFVAEADCEKFARAMNYPIIPCDLCGSQEGLQRQQVKQLLDGWEARSPGRRQVMFRALMNARPSHLLDPSIFDFTGLTAKPGTFSENPPHLGQEF*