name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_1024_1
uncultured bacterium, Bacteria
|
Not on your lists |
399..1076
----------------- DNA (678bp) protein (226aa) |
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F9N2_9BACT
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18207.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1024_2
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1184..1525
----------------- DNA (342bp) protein (114aa) |
Transcriptional regulator, ArsR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1C5_PARDP
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFI28351.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Ha
regulatory protein ArsR
|
|
scnpilot_p_inoc_scaffold_1024_3
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1522..1995
----------------- DNA (474bp) protein (158aa) |
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1C6_PARDP
rbh
activator of Hsp90 ATPase 1 family protein
rbh
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABL69320.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Par
|
|
scnpilot_p_inoc_scaffold_1024_4
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1995..2867
----------------- DNA (873bp) protein (291aa) |
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1C7_PARDP
rbh
activator of Hsp90 ATPase 1 family protein
rbh
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABL69321.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Par
|
|
scnpilot_p_inoc_scaffold_1024_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2888..3598)
----------------- DNA (711bp) protein (237aa) |
Uncharacterized protein {ECO:0000313|EMBL:KGM50884.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
id=3014541 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
|
|
scnpilot_p_inoc_scaffold_1024_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3595..5604)
----------------- DNA (2010bp) protein (670aa) |
von Willebrand factor type A n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVJ5_TISMK
rbh
von willebrand factor type A domain-containing protein {ECO:0000313|EMBL:EYR77598.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" sourc
ywmD; von Willebrand factor type A
|
|
scnpilot_p_inoc_scaffold_1024_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5686..6663)
----------------- DNA (978bp) protein (326aa) |
AraC family transcriptional regulator id=3014620 bin=GWF1_Rhodobacteraceae_65_7 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
AraC family transcriptional regulator Tax=GWF1_Rhodobacteraceae_65_7_curated
AraC family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_1024_8
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6982..7914
----------------- DNA (933bp) protein (311aa) |
Rhodanese domain protein n=1 Tax=Citreicella sp. SE45 RepID=D0D7A2_9RHOB
rbh
Rhodanese domain-containing protein {ECO:0000313|EMBL:KFE36210.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thiocla
rhodanese domain-containing protein
|
|
scnpilot_p_inoc_scaffold_1024_9
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7914..9044
----------------- DNA (1131bp) protein (377aa) |
YeeE/YedE family protein n=1 Tax=Citreicella sp. SE45 RepID=D0D7A1_9RHOB
rbh
YeeE/YedE {ECO:0000313|EMBL:KEO60392.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1024_10
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9041..9205
----------------- DNA (165bp) protein (55aa) |
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D7A0_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX16066.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicel
|
|
scnpilot_p_inoc_scaffold_1024_11
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9417..10820
----------------- DNA (1404bp) protein (468aa) |
aldehyde dehydrogenase n=1 Tax=Paracoccus sp. N5 RepID=UPI0003664E4B
rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KID07432.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1
aldehyde dehydrogenase
rbh
|
|
scnpilot_p_inoc_scaffold_1024_12
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10887..12029
----------------- DNA (1143bp) protein (381aa) |
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00035CBE38
AMP-binding protein {ECO:0000313|EMBL:KID07433.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
AMP-binding enzyme
|
|
scnpilot_p_inoc_scaffold_1024_13
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12239..13132
----------------- DNA (894bp) protein (298aa) |
tRNA 2-thiocytidine biosynthesis protein TtcA id=2683374 bin=GWF1_Rhodobacteraceae_65_7 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA Tax=GWF1_Rhodobacteraceae_65_7_curated
C32 tRNA thiolase
|
|
scnpilot_p_inoc_scaffold_1024_14
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13202..14752
----------------- DNA (1551bp) protein (517aa) |
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4X1_9RHOB
rbh
diguanylate cyclase/phosphodiesterase Tax=CG_Rhodob_01
diguanylate cyclase/phosphodiesterase
|
|
scnpilot_p_inoc_scaffold_1024_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14880..16679
----------------- DNA (1800bp) protein (600aa) |
Membrane protein insertase YidC n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4X2_9RHOB
rbh
putative inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC Tax=GWF1_Rhodobacteraceae_65_7_curated
putative inner membrane protein translocase component YidC
|
|
scnpilot_p_inoc_scaffold_1024_16
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16676..17422
----------------- DNA (747bp) protein (249aa) |
MOSC domain containing protein id=2775812 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
MOSC domain-containing protein; K07140 Tax=GWF1_Rhodobacteraceae_65_7_curated
MOSC domain-containing protein
|
|
scnpilot_p_inoc_scaffold_1024_17
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17419..18072
----------------- DNA (654bp) protein (218aa) |
Probable GTP-binding protein EngB id=2775746 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
GTP-binding protein
|
|
scnpilot_p_inoc_scaffold_1024_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18069..18443
----------------- DNA (375bp) protein (125aa) |
Protein CrcB homolog id=2775743 bin=GWF1_Rhodobacteraceae_65_7 species=Sagittula stellata genus=Sagittula taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
CrcB protein; K06199 CrcB protein Tax=GWF1_Rhodobacteraceae_65_7_curated
camphor resistance protein CrcB
|
|
scnpilot_p_inoc_scaffold_1024_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18440..19486
----------------- DNA (1047bp) protein (349aa) |
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=GWF1_Rhodobacteraceae_65_7_curated
Pseudouridine synthase id=2775740 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
RluA family pseudouridine synthase
|
|
scnpilot_p_inoc_scaffold_1024_20
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19486..20193
----------------- DNA (708bp) protein (236aa) |
ATP12 ATPase id=2775737 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
ATP12 ATPase Tax=GWF1_Rhodobacteraceae_65_7_curated
ATP12 ATPase
|
|
scnpilot_p_inoc_scaffold_1024_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20416..21432
----------------- DNA (1017bp) protein (339aa) |
Cationic amino acid ABC transporter, periplasmic binding protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4Y2_9RHOB
rbh
bztA; glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein BztA; K09969 general L-amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobac
bztA; glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein BztA
|
|
scnpilot_p_inoc_scaffold_1024_22
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21550..22866
----------------- DNA (1317bp) protein (439aa) |
Amino acid ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKN5_9RHOB
rbh
bztB; glutamate/aspartate ABC transporter permease BztB; K09970 general L-amino acid transport system permease protein Tax=GWF1_Rhodobacteraceae_65_7_curated
bztB; glutamate/aspartate ABC transporter permease BztB
|
|
scnpilot_p_inoc_scaffold_1024_23
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22868..24175
----------------- DNA (1308bp) protein (436aa) |
Amino acid ABC transporter permease n=1 Tax=Rhodobacter capsulatus B6 RepID=V8H6D9_RHOCA
rbh
bztC; glutamate/aspartate ABC transporter permease BztC; K09971 general L-amino acid transport system permease protein Tax=GWF1_Rhodobacteraceae_65_7_curated
bztC; glutamate/aspartate ABC transporter permease BztC
|
|
scnpilot_p_inoc_scaffold_1024_24
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24187..24966
----------------- DNA (780bp) protein (260aa) |
Arginine ABC transporter ATP-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKW9_9RHOB
rbh
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW61663.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" sour
ABC transporter
|
|
scnpilot_p_inoc_scaffold_1024_25
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25021..25527)
----------------- DNA (507bp) protein (169aa) |
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
Phosphoglycerate mutase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKN7_9RHOB
putative phosphohistidine phosphatase SixA
|
|
scnpilot_p_inoc_scaffold_1024_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25524..26180)
----------------- DNA (657bp) protein (219aa) |
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B49509
rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
rbh
|
|
scnpilot_p_inoc_scaffold_1024_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26248..27147)
----------------- DNA (900bp) protein (300aa) |
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Acetylglutamate kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKX5_9RHOB
rbh
acetylglutamate kinase
rbh
|
|
scnpilot_p_inoc_scaffold_1024_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27254..27985
----------------- DNA (732bp) protein (244aa) |
Oxidoreductase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EN61_9RHOB
rbh
short-chain dehydrogenase/reductase SDR Tax=GWF1_Rhodobacteraceae_65_7_curated
short-chain dehydrogenase/reductase SDR
|
|
scnpilot_p_inoc_scaffold_1024_29
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28444..28866)
----------------- DNA (423bp) protein (141aa) |
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036705ED
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1024_30
unknown
|
Not on your lists |
comp(28863..29105)
----------------- DNA (243bp) protein (81aa) |
This feature has no annotations |