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scnpilot_p_inoc_scaffold_1024_19

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 18440..19486

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 348.0
  • Bit_score: 658
  • Evalue 5.50e-186
Pseudouridine synthase id=2775740 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 349.0
  • Bit_score: 658
  • Evalue 3.90e-186
  • rbh
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 344.0
  • Bit_score: 605
  • Evalue 8.50e-171

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGAGCGGTGTGAAACTGCTGACCGTTTCCGAGGATGAGGGCGAACAGCGGCTCGACCGCTGGTTCAAGCGCCGCTTTCCGCATGTGACTCAGGGCGCGGTCGAAAAGATGTGCCGCACCGGGCAGGTGCGGGTGGATGGCAAGCGCGCAAAAGCGGCGGATCGCGTCGCACCGGGTACGGTGATCCGCGTGCCGCCGCTGCCGGAAAATGACGCCCCCTCGCGGCCGCGCCCCGATGGCGTCAGCGCAGCAGATACGCGGATGATCCAGGATGCGGTGATCTTCAGGGACGAGCATATCATCGTGCTGAACAAGCCGCCGGGGCTGCCCTCGCAGGGCGGCTCGGGTCAGGGCGACCGGCATGTCGACGGGCTGACCGAGGCGCTGAAATTCGGCTACAAGGACCGGCCGAAGCTGGTGCACCGGCTGGACAAGGATACTTCGGGTGTCCTGGTTCTGGCCCGCACCGACCGGGTGGCCCGCGCCCTGTCCGAGGCGTTTCGTCACCGCAATACCCGCAAGATTTACTGGGCCGTCGTCGCGGGCGTTCCACAGCCCAAGCAGGGCTCGATCAAATATGCGCTGATGAAGGCACCGGGCCGTGGCCGGGGTGGCGAGGGCGAGAAGATGGTCTGCATCCATCCTGCCAAGGTTGGTGATTACCCCGATGCCAAGCGGGCGCAGACCGATTACTTCACGCTCTGGTTCCTTGGCACCCGGCTGAGCTGGATGGCGCTGGAGCCGATCACCGGCCGTACCCACCAGCTGCGCGCCCATATGGCCGAGTTCGGTCATCCGATTCTCGGGGATGGCAAGTATGGTGGCTCGGACGCTGAAAATCTGGGCGATGGCTGGGGCGCTGGCACCGGCGGTGATCTGTCGCGCAAGCTGCACCTGCATGCCCGGCGGCTGAGCATCGAGCATCCGATCACCAGGGAACCGATCACCTTCACCGCCCCCCTGCCCGAGCATATGGCCCGCACCTGGAAGCTGCTCGACTGGAAAGAGGGCGACGTGCCGGAAGACCCGTTCGAAAAGCTGCACTGA
PROTEIN sequence
Length: 349
MSGVKLLTVSEDEGEQRLDRWFKRRFPHVTQGAVEKMCRTGQVRVDGKRAKAADRVAPGTVIRVPPLPENDAPSRPRPDGVSAADTRMIQDAVIFRDEHIIVLNKPPGLPSQGGSGQGDRHVDGLTEALKFGYKDRPKLVHRLDKDTSGVLVLARTDRVARALSEAFRHRNTRKIYWAVVAGVPQPKQGSIKYALMKAPGRGRGGEGEKMVCIHPAKVGDYPDAKRAQTDYFTLWFLGTRLSWMALEPITGRTHQLRAHMAEFGHPILGDGKYGGSDAENLGDGWGAGTGGDLSRKLHLHARRLSIEHPITREPITFTAPLPEHMARTWKLLDWKEGDVPEDPFEKLH*