ggKbase home page

scnpilot_p_inoc_scaffold_1332_6

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(4263..5603)

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Martelella mediterranea RepID=UPI0003617DC3 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 415.0
  • Bit_score: 677
  • Evalue 1.00e-191
  • rbh
Transposase {ECO:0000313|EMBL:KFI26396.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.; similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 415.0
  • Bit_score: 682
  • Evalue 4.50e-193
transposase IS204/IS1001/IS1096/IS1165 family protein similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 469.0
  • Bit_score: 542
  • Evalue 8.70e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haematobacter massiliensis → Haematobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
GTGGCGACCCCTTATGCGCGCCGGACGTCTCGACAGGCGCAACTCTTAGGCCATGTGGCGCACGCCGCTGGCGGCACCCCAGCTGAACGGCTCTTGCGGCGACTGGGTATCCGGGTCAGTGACGATACTATTCTCCGACAGTTGCTACGCGCAGCTCAAGTTGTTCCACCACGCGCACGGATCATCGGGATCGATGATTGGAGTTGGCGAAAGTCGCAGAACTACGGGACGATCATCATCGACCTCGAGCGTCGCGCCGTCATCGATGTTCTCGAAGATCGTGATGTCGTCACATGCACCGACTGGCTAAGGCGTCATCCTGAGGTGGAAGTCATAAGCCGGGATCGCTGCGGTCTCTACGCCCAAGCCGCCCGAAAAGGAGCGCCGCAGGCGGAACAGGTCGCCGACCGGTTTCATATCGTGCAGAACCTTCGCATGGCAATCGAGGAGCAAATGAACTTGCACGGTCGCGCGACTGGCAGAGCATTGCTCTCCGATGCAGACAACATCAGCACGGCCAGTAACCTTCTGAAGTCACGTCTTGCGCACCGCAAGTATCGCGAGGAGATATACGAGACAATTCGGGCACTTCGGCAGCAAGGGCTGACGTGCAGCGAGATCGGGCGGAGGACGGGGTTTCCCCGACGTAGCGTCGCGAAATGGCTGCAGTTCGAGACGCCACCGGACCGAAAGCGCGCGGTCCTCAAACGCTCGTCTGCATGGTATTTTGAAGAGTACCTGAAGCAACGCTGGGAGAACGGTATTCGCAGCGGCAATGCACTGCTCCCTTTGATCCAAGAACGTGGTTACGAGGGCAGCCTGTCAAACTTGCAGCGGCTCTTGGCCGGATGGCGCAGAGCCGAAAAACAGGAACAGGAGGGACCCATCAAGGAAGATCAGATCCTTGCACCGGTCCGGGACCCGGAAACCGGGCACGCGATTTCCCCGGTTATAGCGGCCGCACTCTGCATCAAACCAAGAGGAAAGTTCACCTTGGAACAGGCGAGAAAAGTCGAAGTTCTCAAGGAAGGCTCGCCTGCCTTCACAACAATGCGGCGCCTCGCCATGCGTTTCAATGGCATCTTGCGTGGTCGAAAAGCAGACCCGCTGCCCGCCTGGATCGACGATGCGATCGAAACGGACCTGGCGCCCATCGTGCGGTTCGCCCGAACCTTGAACAGAGACATTGATGCGGTCAGGAATGCGATCGAAATGGAGTGGAGCAATGGTCAAGCCGAAGGCCAGATCAACCGATTGAAGACCTTGAAGCGCGCGATGTATGGGCGAGCCGGCCCGAACTTGCTCAGGGCCCGAATGCTTCCTCTGCACCACACAAATTGA
PROTEIN sequence
Length: 447
VATPYARRTSRQAQLLGHVAHAAGGTPAERLLRRLGIRVSDDTILRQLLRAAQVVPPRARIIGIDDWSWRKSQNYGTIIIDLERRAVIDVLEDRDVVTCTDWLRRHPEVEVISRDRCGLYAQAARKGAPQAEQVADRFHIVQNLRMAIEEQMNLHGRATGRALLSDADNISTASNLLKSRLAHRKYREEIYETIRALRQQGLTCSEIGRRTGFPRRSVAKWLQFETPPDRKRAVLKRSSAWYFEEYLKQRWENGIRSGNALLPLIQERGYEGSLSNLQRLLAGWRRAEKQEQEGPIKEDQILAPVRDPETGHAISPVIAAALCIKPRGKFTLEQARKVEVLKEGSPAFTTMRRLAMRFNGILRGRKADPLPAWIDDAIETDLAPIVRFARTLNRDIDAVRNAIEMEWSNGQAEGQINRLKTLKRAMYGRAGPNLLRARMLPLHHTN*