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scnpilot_p_inoc_scaffold_1332

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1332_1
Paracoccus sp. SY, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..765
DNA (765bp) protein (255aa)
AioA {ECO:0000313|EMBL:AKE49356.1}; Arsenite oxidase large subunit {ECO:0000313|EMBL:AJA37538.1}; EC=1.20.9.1 {ECO:0000313|EMBL:AJA37538.1};; TaxID=1330255 species="Bacteria; Proteobacteria; Alphaprot
Arsenite oxidase large subunit n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EI53_9RHOB
arsenite oxidase, large subunit
scnpilot_p_inoc_scaffold_1332_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

832..1344
DNA (513bp) protein (171aa)
3-dehydroquinate dehydratase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EG18_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1332_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1593..2003
DNA (411bp) protein (137aa)
Cytochrome c class I n=1 Tax=uncultured bacterium RepID=K2BCC5_9BACT
cycA1; cytochrome c2; K08738 cytochrome c Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
cycA1; cytochrome c2
scnpilot_p_inoc_scaffold_1332_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2091..2954)
DNA (864bp) protein (288aa)
UspA n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4B1_9RHOB rbh
UspA domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
UspA-related protein nucleotide-binding protein
scnpilot_p_inoc_scaffold_1332_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2968..4260)
DNA (1293bp) protein (431aa)
Antisigma-factor antagonist, STAS n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V4L2_9RHOB
sulfate transporter Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
sulfate transporter
scnpilot_p_inoc_scaffold_1332_6
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4263..5603)
DNA (1341bp) protein (447aa)
transposase n=1 Tax=Martelella mediterranea RepID=UPI0003617DC3 rbh
Transposase {ECO:0000313|EMBL:KFI26396.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;
transposase IS204/IS1001/IS1096/IS1165 family protein
scnpilot_p_inoc_scaffold_1332_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5833..6678)
DNA (846bp) protein (282aa)
Two component transcriptional regulator, winged helix family id=2942033 bin=GWF1_Rhodobacteraceae_65_7 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWF1_Rhodobacteraceae_65_7_curated
two component transcriptional regulator
scnpilot_p_inoc_scaffold_1332_8
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6767..7294)
DNA (528bp) protein (176aa)
Thiol-disulfide interchange protein {ECO:0000313|EMBL:KFI26376.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haem
Thioredoxin-like protein id=3002031 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
tlpA; putative thioredoxin, thioldisulfide interchange protein
scnpilot_p_inoc_scaffold_1332_9
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7354..8829)
DNA (1476bp) protein (492aa)
Copper oxidase {ECO:0000313|EMBL:KFI26375.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensi
Multicopper oxidase type 2 id=2942032 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
multicopper oxidase family protein
scnpilot_p_inoc_scaffold_1332_10
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8896..9252)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26405.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
id=3002039 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
scnpilot_p_inoc_scaffold_1332_11
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9439..10050
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26374.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
Putative uncharacterized protein id=3002041 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1332_12
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10149..10616
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGE9_9RHOB
Metal-binding protein {ECO:0000313|EMBL:KFI26373.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter mass
hypothetical protein
scnpilot_p_inoc_scaffold_1332_13
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10623..11165)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EH83_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW59350.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
hypothetical protein
scnpilot_p_inoc_scaffold_1332_14
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11216..11797
DNA (582bp) protein (194aa)
UPI0003D1B5B0 related cluster n=1 Tax=unknown RepID=UPI0003D1B5B0
Contig41, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50747.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
hypothetical protein
scnpilot_p_inoc_scaffold_1332_15
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11755..12480)
DNA (726bp) protein (242aa)
Membrane protein {ECO:0000313|EMBL:KFI26372.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massilien
27kDa outer membrane protein id=3002052 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
DSBA oxidoreductase
scnpilot_p_inoc_scaffold_1332_16
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12591..13067)
DNA (477bp) protein (159aa)
Cytochrome C {ECO:0000313|EMBL:KFI26371.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.
Cytochrome c family protein id=3002057 bin=GWF1_Rhodobacteraceae_65_7 species=Ruegeria pomeroyi genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
cytochrome c family protein
scnpilot_p_inoc_scaffold_1332_17
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13064..15016)
DNA (1953bp) protein (651aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein {ECO:0000313|EMBL:KFI26370.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter
Division-specific transpeptidase id=3002063 bin=GWF1_Rhodobacteraceae_65_7 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_1332_18
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15003..15746)
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26369.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
Putative uncharacterized protein id=3002068 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1332_19
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15743..16234)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26403.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
Uncharacterized protein id=3002073 bin=GWF1_Rhodobacteraceae_65_7 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
scnpilot_p_inoc_scaffold_1332_20
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16224..16652)
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26402.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
id=3002078 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
scnpilot_p_inoc_scaffold_1332_21
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16642..17625)
DNA (984bp) protein (328aa)
Cytochrome C {ECO:0000313|EMBL:KFI26368.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.
Cytochrome c id=3002079 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Cytochrome c, mono- and diheme variant
scnpilot_p_inoc_scaffold_1332_22
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17628..18272)
DNA (645bp) protein (215aa)
Cytochrome c-like protein {ECO:0000313|EMBL:KFI26367.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter
Putative cytochrome c-like protein id=3002084 bin=GWF1_Rhodobacteraceae_65_7 species=Celeribacter baekdonensis genus=Celeribacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
putative cytochrome c-like protein
scnpilot_p_inoc_scaffold_1332_23
unknown

Not on your lists

comp(18439..18813)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1332_24
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18818..19378)
DNA (561bp) protein (187aa)
ErfK/YbiS/YcfS/YnhG family protein id=3002089 bin=GWF1_Rhodobacteraceae_65_7 species=Celeribacter baekdonensis genus=Celeribacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
ErfK/YbiS/YcfS/YnhG family protein Tax=GWF1_Rhodobacteraceae_65_7_curated
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_p_inoc_scaffold_1332_25
unknown

Not on your lists

19560..19862
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1332_26
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19900..20463
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26365.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein id=3002093 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacterales bacterium Y4I genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_p_inoc_scaffold_1332_27
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20460..21227
DNA (768bp) protein (256aa)
DSBA oxidoreductase {ECO:0000313|EMBL:KFI26364.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massil
Uncharacterized protein id=3002097 bin=GWF1_Rhodobacteraceae_65_7 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1332_28
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21232..21819
DNA (588bp) protein (196aa)
Cobalamin biosynthesis protein CobQ {ECO:0000313|EMBL:KFI26363.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haem
Cobyric acid synthase id=3002136 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius nubinhibens genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1332_29
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21825..22697)
DNA (873bp) protein (291aa)
ATPase {ECO:0000313|EMBL:KFI26362.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
Heavy metal translocating P-type ATPase id=3002138 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
heavy metal translocating P-type ATPase
Displaying 29 items

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