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scnpilot_p_inoc_scaffold_1355_7

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3602..4360)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LU94_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 242.0
  • Bit_score: 251
  • Evalue 8.00e-64
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AKH99310.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 242.0
  • Bit_score: 266
  • Evalue 3.40e-68
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 242.0
  • Bit_score: 251
  • Evalue 2.30e-64

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Taxonomy

Hoeflea sp. IMCC20628 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGACAGAAACCCCCGAAACCCGCCCCGACCGCCTGTCCAGCCTGATGGCGCGCTTCACATTGTCCGTCAGCCCCGCACCTGTGGGCACGGGAAACCTGATCGTGCTGGCAACACAGGACGGCACGGCAGATCACGCACTGCTGTGCCTGCGCGGCAAGGCGCTGCACAGCAGCGAGCGGGCGCCGTTACTCTCGGCCCGCGTTGATTGGGGCGGGGTGGCCAACCCGCTGGCCAGCGCTCTGCCAGATCCGGTACGCGTCGATCTGCGGCAGGATGCTGAAGGCGCCACGCTGATCGGCCTGCTTCAGGCCGAGATCACCGGCCCGCGCTGTGGCAGTGCATCCGTCATCGCGCGGCTGATCGAAGTTCTGATTGTACGGATGCTGCGGGACTGCATCGCCTCGGGCTCTGCCACACCCGGCCTTCTGGCAGGCCTGGCAGACCCCCGGCTCAGCCGCGCCATCGTCGCCATTCACGACCAGCCCGAAAAAACCTGGCTGAATGACGATCTCGCCGCCATCGCGGGCCTCCCGCTGAGCCGGTTCGCAGACCTGTTCACTGTAACCATGGGCGAAACGCCCGGGGCCTATGCCCGCCGGTGGCGGCTGTTGCTGGCCCGGCAGGATCTGGCGCGCGGCCAGCGGGTTGAGCGTGTGGCGCATCGTTACGGTTATGGCTCGGCCGAAGGGTTCAGCCGCGCCTACCGGCAGCATTTCGGCACAGCGCCCATAGCTGAGCGCAAGCGCCACAGCGCCTGA
PROTEIN sequence
Length: 253
MTETPETRPDRLSSLMARFTLSVSPAPVGTGNLIVLATQDGTADHALLCLRGKALHSSERAPLLSARVDWGGVANPLASALPDPVRVDLRQDAEGATLIGLLQAEITGPRCGSASVIARLIEVLIVRMLRDCIASGSATPGLLAGLADPRLSRAIVAIHDQPEKTWLNDDLAAIAGLPLSRFADLFTVTMGETPGAYARRWRLLLARQDLARGQRVERVAHRYGYGSAEGFSRAYRQHFGTAPIAERKRHSA*