ggKbase home page

scnpilot_p_inoc_scaffold_26

Search features with annotation key words

Displaying items 301-330 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_26_301
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

353829..354731
DNA (903bp) protein (301aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037940D4 rbh
glutamyl-Q tRNA(Asp) ligase
scnpilot_p_inoc_scaffold_26_302
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

354815..355555
DNA (741bp) protein (247aa)
NODE_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96738.1}; EC=1.1.1.36 {ECO:0000313|EMBL:KIQ96738.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
3-ketoacyl-ACP reductase (EC:1.1.1.36)
3-ketoacyl-ACP reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E4584 rbh
scnpilot_p_inoc_scaffold_26_303
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355748..356242
DNA (495bp) protein (165aa)
poly (3-hydroxybutyrate) depolymerase n=1 Tax=Dyella ginsengisoli RepID=UPI000349E3EC
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:KJV32026.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Lute
poly (3-hydroxybutyrate) depolymerase
scnpilot_p_inoc_scaffold_26_304
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356351..357097
DNA (747bp) protein (249aa)
3-ketoacyl-ACP reductase (EC:1.1.1.36)
3-ketoacyl-ACP reductase n=1 Tax=Dyella ginsengisoli RepID=UPI0003457E17
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EIL88489.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
scnpilot_p_inoc_scaffold_26_305
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357162..357776)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F1118
Nucleoprotein/polynucleotide-associated enzyme {ECO:0000313|EMBL:EIL95139.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
hypothetical protein
scnpilot_p_inoc_scaffold_26_306
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357819..358040)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C6325
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13636.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_26_307
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(358042..359166)
DNA (1125bp) protein (375aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=983917 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWV9_RUBGI
scnpilot_p_inoc_scaffold_26_308
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359204..360544)
DNA (1341bp) protein (447aa)
UDP-glucose 6-dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000369473F rbh
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KFN44652.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas ory
nucleotide sugar dehydrogenase
scnpilot_p_inoc_scaffold_26_309
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360667..361410)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E146F
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_26_310
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

361612..363504
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380CABE rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHK79030.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source=
scnpilot_p_inoc_scaffold_26_311
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

363561..365282
DNA (1722bp) protein (574aa)
adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4) Tax=GWB2_Deltaproteobacteria_55_19_curated
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (EC:2.7.7.4)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL12 RepID=UPI00035FB9D1 rbh
scnpilot_p_inoc_scaffold_26_312
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365326..365880)
DNA (555bp) protein (185aa)
vitamin B12 ABC transporter permease n=1 Tax=Xanthomonas sacchari RepID=UPI0002631D47
vitamin B12 ABC transporter permease
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas saccha
scnpilot_p_inoc_scaffold_26_313
unknown

Not on your lists

366071..366430
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_26_314
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

366435..366809
DNA (375bp) protein (125aa)
GntR family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000348C3CE
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AIF47794.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
scnpilot_p_inoc_scaffold_26_315
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

366806..367663
DNA (858bp) protein (286aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WD27_9GAMM rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL97368.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
ABC-type multidrug transport system, ATPase component
scnpilot_p_inoc_scaffold_26_316
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

367660..368631
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373E0A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM54960.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
hypothetical protein
scnpilot_p_inoc_scaffold_26_317
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(369186..370313)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364E4BA
Uncharacterized protein {ECO:0000313|EMBL:CDJ29531.1}; TaxID=44415 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeri
hypothetical protein
scnpilot_p_inoc_scaffold_26_318
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370446..371846)
DNA (1401bp) protein (467aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1121014 species="Bacteria; Prot
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BYY2_9XANT
scnpilot_p_inoc_scaffold_26_319
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

371937..373304
DNA (1368bp) protein (456aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZFM9_XANCT
adenylosuccinate lyase
scnpilot_p_inoc_scaffold_26_320
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

373410..374603
DNA (1194bp) protein (398aa)
Transcription factor {ECO:0000313|EMBL:KJV33869.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensi
hypothetical protein XsacN4_19968 id=2882827 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
transcription factor
scnpilot_p_inoc_scaffold_26_321
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

374600..375562
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL38099.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
GCN5-related N-acetyltransferase id=2882830 bin=GWF1_Xanthomonadales_69_6 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_26_322
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375713..378559
DNA (2847bp) protein (949aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EIL95107.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EIL95107.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
sucA; 2-oxoglutarate dehydrogenase (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L6_9GAMM rbh
scnpilot_p_inoc_scaffold_26_323
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378565..379788
DNA (1224bp) protein (408aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
dihydrolipoamide succinyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000365E744 rbh
dihydrolipoamide succinyltransferase
scnpilot_p_inoc_scaffold_26_324
unknown

Not on your lists

379791..380171
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_26_325
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

380262..381686
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthom
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B37F32 rbh
scnpilot_p_inoc_scaffold_26_326
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

381919..382794
DNA (876bp) protein (292aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria;
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2514 rbh
methyltransferase
scnpilot_p_inoc_scaffold_26_327
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

382916..383914
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372BBEB rbh
quinone oxidoreductase
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_26_328
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

384056..384421
DNA (366bp) protein (122aa)
PilH family regulatory protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W990_9GAMM
PilH family regulatory protein {ECO:0000313|EMBL:EIL96031.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_p_inoc_scaffold_26_329
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(384551..385420)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003604A45
DnaJ-class molecular chaperone with C-terminal Zn finger domain
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AFC85567.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; F
scnpilot_p_inoc_scaffold_26_330
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(385601..386050)
DNA (450bp) protein (150aa)
Low molecular weight heat shock protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6K9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL38106.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
molecular chaperone
Displaying items 301-330 of 360 in total

View Taxonomy