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scnpilot_p_inoc_scaffold_48

Search features with annotation key words

Displaying items 61-90 of 546 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_48_61
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95689..96753
DNA (1065bp) protein (355aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=666685 species
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371D83F rbh
iron-sulfur cluster binding protein, putative
scnpilot_p_inoc_scaffold_48_62
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96910..98535)
DNA (1626bp) protein (542aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CDFA5 rbh
glucose-6-phosphate isomerase
scnpilot_p_inoc_scaffold_48_63
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99388..100236)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003668ACE rbh
pantoate--beta-alanine ligase
scnpilot_p_inoc_scaffold_48_64
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100236..101060)
DNA (825bp) protein (275aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Dyella japonica RepID=UPI000300D006 rbh
scnpilot_p_inoc_scaffold_48_65
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101157..101651)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E003C6
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KGI77903.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
scnpilot_p_inoc_scaffold_48_66
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101648..103090)
DNA (1443bp) protein (481aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1379159 species="Bacteria; Proteobacteria;
polynucleotide adenylyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000345561F rbh
poly(A) polymerase
scnpilot_p_inoc_scaffold_48_67
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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103222..103545
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B684EF
ferredoxin protein
Putative ferredoxin protein {ECO:0000313|EMBL:CBA15699.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas al
scnpilot_p_inoc_scaffold_48_68
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103586..104125)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAM7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96518.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_48_69
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104171..105055)
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dihydrodipicolinate synthase (EC:4.2.1.52)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E272B rbh
scnpilot_p_inoc_scaffold_48_70
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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105199..105759
DNA (561bp) protein (187aa)
Glycine cleavage system regulatory protein {ECO:0000313|EMBL:KFN48969.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source=
Probable glycine cleavage system transcriptional repressor protein id=2750887 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
glycine cleavage system transcriptional repressor
scnpilot_p_inoc_scaffold_48_71
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105762..106223
DNA (462bp) protein (154aa)
peroxiredoxin n=1 Tax=Dyella japonica RepID=UPI0002FAD9D0
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AIF48929.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
scnpilot_p_inoc_scaffold_48_72
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106304..107695
DNA (1392bp) protein (464aa)
Phoh-like protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7G8E8_XANCT
phosphate starvation protein PhoH
Phoh-like protein {ECO:0000313|EMBL:ELQ01996.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens
scnpilot_p_inoc_scaffold_48_73
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107967..109091)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E7D51
SalD; K06076 long-chain fatty acid transport protein Tax=GWF1_Xanthomonadales_69_6_curated
SalD
scnpilot_p_inoc_scaffold_48_74
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109295..110113
DNA (819bp) protein (273aa)
phosphomethylpyrimidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B69EC0
Uncharacterized protein {ECO:0000313|EMBL:KFN41176.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
phosphomethylpyrimidine kinase
scnpilot_p_inoc_scaffold_48_75
unknown

Not on your lists

110250..110549
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_76

Not on your lists

110546..112867
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036667C0 rbh
Marine sediment metagenome DNA, contig: S03H2_L06005 {ECO:0000313|EMBL:GAH40793.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
scnpilot_p_inoc_scaffold_48_77
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112931..113944)
DNA (1014bp) protein (338aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:KGI77890.1}; EC=1.1.1.41 {ECO:0000313|EMBL:KGI77890.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
isocitrate dehydrogenase (EC:1.1.1.41)
isocitrate dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003660BB7 rbh
scnpilot_p_inoc_scaffold_48_78
unknown

Not on your lists

114034..115155
DNA (1122bp) protein (374aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_79
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(115175..115561)
DNA (387bp) protein (129aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUW0_PSEUU
alkylhydroperoxidase like protein
scnpilot_p_inoc_scaffold_48_80
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115558..115806)
DNA (249bp) protein (83aa)
Glutaredoxin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKD8_9GAMM
Glutaredoxin {ECO:0000313|EMBL:EIL87679.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.
Glutaredoxin, GrxC family
scnpilot_p_inoc_scaffold_48_81
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116035..117714
DNA (1680bp) protein (560aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=1475481 species="Bacteria; Proteobacteria; G
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BAD49 rbh
putative Zn-dependent protease
scnpilot_p_inoc_scaffold_48_82
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117811..118452
DNA (642bp) protein (214aa)
PhoB family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F4AF8
transcriptional regulator PhoB
Transcriptional regulator PhoB {ECO:0000313|EMBL:AHX12599.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangnin
scnpilot_p_inoc_scaffold_48_83
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118484..119794
DNA (1311bp) protein (437aa)
histidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2FD7E
histidine kinase
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_48_84
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119794..120717
DNA (924bp) protein (308aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Pantoea sp. A4 RepID=UPI00036282DA
phosphate ABC transporter substrate-binding protein
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIX74578.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.
scnpilot_p_inoc_scaffold_48_85

Not on your lists

120714..122801
DNA (2088bp) protein (696aa)
Polyphosphate kinase {ECO:0000313|EMBL:EQD58224.1}; EC=2.7.4.1 {ECO:0000313|EMBL:EQD58224.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" so
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003722EBE rbh
polyphosphate kinase
scnpilot_p_inoc_scaffold_48_86
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122869..124392
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E8C52 rbh
Exopolyphosphatase {ECO:0000313|EMBL:EIL96412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thioox
exopolyphosphatase
scnpilot_p_inoc_scaffold_48_87

Not on your lists

124474..125130
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003633DE8
Marine sediment metagenome DNA, contig: S01H1_S14329 {ECO:0000313|EMBL:GAG00995.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
peptidylprolyl isomerase
scnpilot_p_inoc_scaffold_48_88
unknown

Not on your lists

comp(125237..125737)
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_89

Not on your lists

comp(125867..127261)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72435.1}; TaxID=1256558 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
scnpilot_p_inoc_scaffold_48_90
unknown

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comp(127619..128116)
DNA (498bp) protein (166aa)

This feature has no annotations

Displaying items 61-90 of 546 in total

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