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scnpilot_p_inoc_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 546 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_48_1
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67..366
DNA (300bp) protein (100aa)
Transposase IS3/IS911 family protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DYR8_9GAMM
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ESS72461.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="
transposase
scnpilot_p_inoc_scaffold_48_2
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378..1079
DNA (702bp) protein (234aa)
ISCja1, transposase orfB n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PCD9_CELJU
Integrase {ECO:0000313|EMBL:KHL70250.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
ISCja1, transposase orfB
scnpilot_p_inoc_scaffold_48_3
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1076..1837
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036A02B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD48978.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
scnpilot_p_inoc_scaffold_48_4
unknown

Not on your lists

2169..2795
DNA (627bp) protein (209aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_5
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

3015..5264
DNA (2250bp) protein (750aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DF026 rbh
VCBS repeat-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
scnpilot_p_inoc_scaffold_48_6
GWE2_TM6_36_25, TM6, Bacteria

Not on your lists

comp(5604..7595)
DNA (1992bp) protein (664aa)
Putative uncharacterized protein id=2301675 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
Putative uncharacterized protein Tax=GWE2_TM6_36_25
scnpilot_p_inoc_scaffold_48_7
unknown

Not on your lists

7938..8324
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_8
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8394..9077)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMM8_PSEUO
Transcriptional regulator {ECO:0000313|EMBL:KES22508.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
transcriptional regulator
scnpilot_p_inoc_scaffold_48_9
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9074..10594)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C7F8C
Membrane protein {ECO:0000313|EMBL:KJK04812.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_48_10
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10757..13468
DNA (2712bp) protein (904aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULW5_MYXSD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC49003.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
scnpilot_p_inoc_scaffold_48_11
unknown

Not on your lists

13948..14535
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14811..15044)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AA05
Uncharacterized protein {ECO:0000313|EMBL:GAN45014.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_48_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15041..15181)
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AA05
Uncharacterized protein {ECO:0000313|EMBL:GAN45014.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
scnpilot_p_inoc_scaffold_48_14
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15566..15958
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TC32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KEZ77370.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
hypothetical protein
scnpilot_p_inoc_scaffold_48_15
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16559..17602
DNA (1044bp) protein (348aa)
Histidine kinase family id=2992325 bin=GWF1_Xanthomonadales_69_6 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
signal transduction histidine kinase LytS Tax=GWF1_Xanthomonadales_69_6_curated
histidine kinase internal region
scnpilot_p_inoc_scaffold_48_16
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17599..18360
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LytTR family id=2992326 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
DNA-binding response regulator Tax=GWF1_Xanthomonadales_69_6_curated
LytTr DNA-binding region
scnpilot_p_inoc_scaffold_48_17
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18761..19309
DNA (549bp) protein (183aa)
Uncharacterized protein id=2992324 bin=GWF1_Xanthomonadales_69_6 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_48_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19818..21353
DNA (1536bp) protein (512aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53087.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
Ferredoxin reductase id=2941011 bin=GWF1_Xanthomonadales_69_6 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
oxygenase
scnpilot_p_inoc_scaffold_48_19
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21462..23177)
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q62XX1_BACLD
Triple helix repeat-containing collagen {ECO:0000313|EMBL:AGC43913.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;
hypothetical protein
scnpilot_p_inoc_scaffold_48_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(23180..23497)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:EEF57474.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
scnpilot_p_inoc_scaffold_48_21
unknown

Not on your lists

23770..24102
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_22
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..25408
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=Q8P846_XANCP rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR65422.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_p_inoc_scaffold_48_23

Not on your lists

26006..26275
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S03H2_S18136 {ECO:0000313|EMBL:GAH65137.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
scnpilot_p_inoc_scaffold_48_24
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26272..27918
DNA (1647bp) protein (549aa)
Triple helix repeat-containing collagen n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBB5_MYXFH
Phage tail fiber protein {ECO:0000313|EMBL:KFE68250.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hya
triple helix repeat-containing collagen
scnpilot_p_inoc_scaffold_48_25
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28109..33541)
DNA (5433bp) protein (1811aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E5018
Fibronectin type III domain protein {ECO:0000313|EMBL:ADX44575.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
kelch domain-containing protein
scnpilot_p_inoc_scaffold_48_26
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33798..36902)
DNA (3105bp) protein (1035aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362E7BC rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK07421.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_48_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37118..38578
DNA (1461bp) protein (487aa)
Heat shock protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVQ4_9GAMM rbh
Heat shock protein {ECO:0000313|EMBL:EIL91295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
heat shock protein Hsp70
scnpilot_p_inoc_scaffold_48_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38709..39425
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003819605 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95196.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_48_29
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

40016..45889
DNA (5874bp) protein (1958aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003803750 rbh
conserved repeat domain-containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
scnpilot_p_inoc_scaffold_48_30
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46138..46815)
DNA (678bp) protein (226aa)
Type 12 methyltransferase n=1 Tax=Achromobacter piechaudii HLE RepID=J4PFB5_9BURK rbh
Type 12 methyltransferase {ECO:0000313|EMBL:EJO32477.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter pi
type 12 methyltransferase
Displaying items 1-30 of 546 in total

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