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scnpilot_p_inoc_scaffold_48_8

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(8394..9077)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMM8_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 224.0
  • Bit_score: 282
  • Evalue 2.90e-73
Transcriptional regulator {ECO:0000313|EMBL:KES22508.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 224.0
  • Bit_score: 283
  • Evalue 2.40e-73
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 223.0
  • Bit_score: 268
  • Evalue 2.10e-69

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Taxonomy

Pseudomonas sp. AAC → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGAGCAGCGCGCGCATCCTGATCGTCGAGGACGAACCCAAGCTCGCGGCGCTGCTGCGCGACTATCTGGTCGCCGACGGATTCAGCGTCGATCACCTGGCGCGCGGCGATGCCGCGATCGCGTGGATCCGGCAGAACACGCCGGATCTGGTCGTGCTCGACTTGATGCTGCCGGGCCTCGACGGATTCGGCGTCTGTCGCGAGCTGCGTACGTTCTCGACCGTTCCGGTGATCATGCTGACCGCGCGGATCGAGGAAATCGACCGCCTGCTGGGGCTGGAGCTCGGCGCCGACGACTATGTCTGCAAGCCGTTCAGCCCGCGCGAAGTCGTCGCCCGCGTGCGCGCGCAGCTGCGGCGTGCGCAGCTCTGGCAAGGCGGCGGCGCGCCCAGGCCCGAGATCGAACTGCAGCCCGAGCGCTTCGAGGCGCGCGTGCGCGGCGCGCGGCTTCCGCTGACGCCGGTGGAGTTCCGCCTGCTGCAGGTGCTGATCGCGCATCCCGGCCGGGTGCATTCGCGCAACCAGCTGCTGGATGCGATCTACGTCGACCACCGCGTGGTCAGCGACCGCACCGTCGACAGCCATGTGAAGAATCTGCGCCGCAAGATCGCCGACGCGGCCGGCGGCTACGATCCGATCCAGTCGATCTACGGTATCGGCTACAAATTCGACGAAACCGCCTGA
PROTEIN sequence
Length: 228
MSSARILIVEDEPKLAALLRDYLVADGFSVDHLARGDAAIAWIRQNTPDLVVLDLMLPGLDGFGVCRELRTFSTVPVIMLTARIEEIDRLLGLELGADDYVCKPFSPREVVARVRAQLRRAQLWQGGGAPRPEIELQPERFEARVRGARLPLTPVEFRLLQVLIAHPGRVHSRNQLLDAIYVDHRVVSDRTVDSHVKNLRRKIADAAGGYDPIQSIYGIGYKFDETA*