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scnpilot_p_inoc_scaffold_531

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_531_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)
PREDICTED: elongation factor Tu, chloroplastic-like, partial n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15A0F
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacter
scnpilot_p_inoc_scaffold_531_2
unknown

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773..1444
DNA (672bp) protein (224aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_531_3
unknown

Not on your lists

1447..2037
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_531_4

Not on your lists

2040..2867
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1C407_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD60850.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
P pilus assembly protein, chaperone PapD
scnpilot_p_inoc_scaffold_531_5

Not on your lists

2870..5479
DNA (2610bp) protein (870aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1C6C3_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD60849.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Cna B domain-containing protein
scnpilot_p_inoc_scaffold_531_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

5476..7422
DNA (1947bp) protein (649aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53480.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
scnpilot_p_inoc_scaffold_531_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

7419..8258
DNA (840bp) protein (280aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53479.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
scnpilot_p_inoc_scaffold_531_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8626..9123)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003778D3A
Acyl-CoA hydrolase {ECO:0000313|EMBL:KGI77177.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;
acyl-CoA hydrolase
scnpilot_p_inoc_scaffold_531_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

9733..10749
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F4F12
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_531_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10966..11283
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKN7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89777.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_531_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11443..11841)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360CB73
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40452.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
scnpilot_p_inoc_scaffold_531_12
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11893..12765
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E2B3F rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ59401.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcesc
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_531_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12890..13981)
DNA (1092bp) protein (364aa)
GTP-binding protein YchF n=1 Tax=Dyella japonica RepID=UPI0002F60E30 rbh
ychF; GTP-binding protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
scnpilot_p_inoc_scaffold_531_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14026..14616)
DNA (591bp) protein (197aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase n=1 Tax=Dyella japonica RepID=UPI0002E1A999 rbh
peptidyl-tRNA hydrolase
scnpilot_p_inoc_scaffold_531_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14650..15366)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369F6B3 rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthom
50S ribosomal protein L25/general stress protein Ctc
scnpilot_p_inoc_scaffold_531_16

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comp(15453..16409)
DNA (957bp) protein (319aa)
Ribose-phosphate pyrophosphokinase n=3 Tax=mine drainage metagenome RepID=T1CH97_9ZZZZ rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EQD65649.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribose-phosphate pyrophosphokinase
scnpilot_p_inoc_scaffold_531_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16522..17394)
DNA (873bp) protein (291aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Dyella japonica RepID=UPI0002E37629
4-diphosphocytidyl-2C-methyl-D-erythritol kinase
scnpilot_p_inoc_scaffold_531_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17391..18005)
DNA (615bp) protein (205aa)
Outer-membrane lipoprotein LolB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ25_9GAMM
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
outer membrane lipoprotein LolB
scnpilot_p_inoc_scaffold_531_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18005..19729)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003765CE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14297.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_531_20
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19914..21188
DNA (1275bp) protein (425aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase n=1 Tax=Dyella japonica RepID=UPI0002FB5CF4 rbh
glutamyl-tRNA reductase
scnpilot_p_inoc_scaffold_531_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21185..22270
DNA (1086bp) protein (362aa)
peptide chain release factor 1 n=1 Tax=Dyella japonica RepID=UPI000308AFB2
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
scnpilot_p_inoc_scaffold_531_22
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(22482..23867)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7ZJK0_LYSSH
Uncharacterized protein {ECO:0000313|EMBL:EON74199.1}; TaxID=1285586 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus OT4b.31.;"
hypothetical protein
scnpilot_p_inoc_scaffold_531_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23867..24634)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369E480
Uncharacterized protein {ECO:0000313|EMBL:GAD24402.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
scnpilot_p_inoc_scaffold_531_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24923..25762
DNA (840bp) protein (280aa)
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0S7_VARPE
Uncharacterized protein {ECO:0000313|EMBL:EYR66798.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_531_25
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25793..26236
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KKN2_9BURK
Glyxoylase {ECO:0000313|EMBL:EYR66799.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_531_26
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26352..26819
DNA (468bp) protein (156aa)
Transcriptional regulator, effector-binding domain/component n=1 Tax=Methylomicrobium album BG8 RepID=H8GKE7_METAL
Transcriptional regulator, effector-binding domain/component {ECO:0000313|EMBL:EIC30438.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Meth
transcriptional activator ligand binding domain protein
scnpilot_p_inoc_scaffold_531_27
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26837..27244)
DNA (408bp) protein (136aa)
QacE-like protein n=1 Tax=Aeromonas hydrophila ML09-119 RepID=R4VG52_AERHY
QacE-like protein
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
scnpilot_p_inoc_scaffold_531_28
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27395..28705
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036F4C32 rbh
acetamidase/formamidase
Acetamidase/Formamidase {ECO:0000313|EMBL:AFE04258.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
scnpilot_p_inoc_scaffold_531_29
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28983..30269
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Janthinobacterium lividum RepID=A0SZ27_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EYR70120.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
scnpilot_p_inoc_scaffold_531_30
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30465..30977
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GAR0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EYR68652.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
Displaying items 1-30 of 55 in total

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