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scnpilot_p_inoc_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_581_1
unknown

Not on your lists

2..631
DNA (630bp) protein (210aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_581_2

Not on your lists

comp(539..991)
DNA (453bp) protein (151aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BJQ0_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP49008.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_581_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1284..1682)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RNJ5_XANCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEM56922.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestri
scnpilot_p_inoc_scaffold_581_4
Vibrio sp. HENC-01, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2013..3023
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000366AC40
Uncharacterized protein {ECO:0000313|EMBL:EKM15320.1}; TaxID=992010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. HENC-01.;"
hypothetical protein
scnpilot_p_inoc_scaffold_581_5
unknown

Not on your lists

comp(3139..3417)
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_581_6
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5512..8301
DNA (2790bp) protein (930aa)
UPI0003D65B5B related cluster n=1 Tax=unknown RepID=UPI0003D65B5B
Uncharacterized protein {ECO:0000313|EMBL:KFE50954.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.
hypothetical protein
scnpilot_p_inoc_scaffold_581_7
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8743..9957
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Yersinia enterocolitica RepID=UPI0002F19BBC
Uncharacterized protein {ECO:0000313|EMBL:KFE50956.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.
hypothetical protein
scnpilot_p_inoc_scaffold_581_8
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10266..14165)
DNA (3900bp) protein (1300aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00038162D9
LVIVD {ECO:0000313|EMBL:EDM83000.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
LVIVD
scnpilot_p_inoc_scaffold_581_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14560..16374)
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00035FF279 rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
scnpilot_p_inoc_scaffold_581_10
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16376..18436)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036C7F0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCU74050.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-
scnpilot_p_inoc_scaffold_581_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18752..19174)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4K1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN66283.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
scnpilot_p_inoc_scaffold_581_12
unknown

Not on your lists

comp(19666..20220)
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_581_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20262..21944)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000372FE2B
Uncharacterized protein {ECO:0000313|EMBL:KGK01530.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
cytochrome C
scnpilot_p_inoc_scaffold_581_14

Not on your lists

comp(21961..22869)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W4-39b RepID=H9BWS5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AFD03247.1}; TaxID=1130994 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-39b.;"
hypothetical protein
scnpilot_p_inoc_scaffold_581_15

Not on your lists

comp(23180..25594)
DNA (2415bp) protein (805aa)
Cyclic nucleotide-binding protein n=1 Tax=uncultured bacterium W4-39b RepID=H9BWS4_9BACT rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AFD03246.1}; TaxID=1130994 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-39b.;"
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_581_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25825..27975
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BD6D9 rbh
Acetyl-CoA hydrolase {ECO:0000313|EMBL:KGI77441.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli
acetyl-CoA hydrolase/transferase family protein
scnpilot_p_inoc_scaffold_581_17

Not on your lists

28057..29805
DNA (1749bp) protein (583aa)
Uncharacterized protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A6Z0_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD36654.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_581_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29930..31207
DNA (1278bp) protein (426aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E10EF rbh
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
scnpilot_p_inoc_scaffold_581_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31387..31824
DNA (438bp) protein (146aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI00036A5B87
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEB59448.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
scnpilot_p_inoc_scaffold_581_20
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32360..34270
DNA (1911bp) protein (637aa)
Putative esterase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZZ0_CORCM rbh
besA1; putative esterase
Putative esterase {ECO:0000313|EMBL:AFE08190.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Coralloco
scnpilot_p_inoc_scaffold_581_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34323..34868
DNA (546bp) protein (182aa)
gamma-glutamyl cyclotransferase, partial n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003771BD6
Gamma-glutamyl cyclotransferase {ECO:0000313|EMBL:KGI77498.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
ChaC family protein
scnpilot_p_inoc_scaffold_581_22
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34954..35952)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RUG9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYR67007.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_p_inoc_scaffold_581_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(35958..36374)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DE5E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84332.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
scnpilot_p_inoc_scaffold_581_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(36512..37024)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V4S4_9LEPT
glutathione s-transferase protein
Glutathione s-transferase protein {ECO:0000313|EMBL:AIE84564.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimo
scnpilot_p_inoc_scaffold_581_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37173..37541)
DNA (369bp) protein (123aa)
ArsR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKP0_GLOVI
Pilus assembly protein CpaF {ECO:0000313|EMBL:KFC67244.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcription regulator ArsR
scnpilot_p_inoc_scaffold_581_26
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37618..38286)
DNA (669bp) protein (223aa)
putative hydrolase n=1 Tax=Xanthomonas sacchari RepID=UPI0002630107
Hydrolase {ECO:0000313|EMBL:EYR68399.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hydrolase
scnpilot_p_inoc_scaffold_581_27
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38294..38704)
DNA (411bp) protein (137aa)
Lipoprotein n=8 Tax=Klebsiella RepID=D6GHE2_9ENTR
lipoprotein
Choline dehydrogenase {ECO:0000313|EMBL:EWD81250.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneum
scnpilot_p_inoc_scaffold_581_28
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38965..40266
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003655565
Amidohydrolase {ECO:0000313|EMBL:KGB56840.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;
putative hydrolase
scnpilot_p_inoc_scaffold_581_29
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40500..42671
DNA (2172bp) protein (724aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0P3_9RHOO
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_13_Deltaproteobacteria_65_10_curated
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
scnpilot_p_inoc_scaffold_581_30
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

42664..45369
DNA (2706bp) protein (902aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXZ6_9BACT rbh
PAS sensor protein Tax=RBG_16_Chloroflexi_68_14_curated
sensory box histidine kinase
Displaying items 1-30 of 49 in total

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