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scnpilot_p_inoc_scaffold_829

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_829_1
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57..2519)
DNA (2463bp) protein (821aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
ribonucleoside-diphosphate reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4D611
ribonucleoside-diphosphate reductase
scnpilot_p_inoc_scaffold_829_2
unknown

Not on your lists

comp(3139..3732)
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_829_3
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3982..4551)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL35958.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
scnpilot_p_inoc_scaffold_829_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4971..6311)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSS0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33633.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_829_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6518..7309
DNA (792bp) protein (264aa)
Acyl-CoA thioesterase n=2 Tax=Rhodanobacter RepID=M4NBR7_9GAMM
acyl-CoA thioesterase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
acyl-CoA thioesterase
scnpilot_p_inoc_scaffold_829_6
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7382..8674)
DNA (1293bp) protein (431aa)
Outer membrane efflux protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT27_PSEUP rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AER56092.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseud
scnpilot_p_inoc_scaffold_829_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8671..9003)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1D8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01191.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_829_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9000..12092)
DNA (3093bp) protein (1031aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS0_COMTE
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:KCV66894.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
cytochrome C peroxidase
scnpilot_p_inoc_scaffold_829_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12104..13306)
DNA (1203bp) protein (401aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9F8_ALIDK rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEB83373.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
scnpilot_p_inoc_scaffold_829_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13597..15012)
DNA (1416bp) protein (472aa)
Histidine kinase A domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1D3_ALIDB rbh
histidine kinase a domain-containing protein rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEB83376.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyc
scnpilot_p_inoc_scaffold_829_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15013..15678)
DNA (666bp) protein (222aa)
transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI00039585B7
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX35352.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
scnpilot_p_inoc_scaffold_829_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15776..16768)
DNA (993bp) protein (331aa)
GumN protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B77CA5
GumN protein {ECO:0000313|EMBL:EYR70345.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
gumN; GumN protein
scnpilot_p_inoc_scaffold_829_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16909..17343
DNA (435bp) protein (145aa)
GCN5 family acetyltransferase n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI00035EC560
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AHG92785.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_p_inoc_scaffold_829_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17390..18568)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQI9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGI78470.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
scnpilot_p_inoc_scaffold_829_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18838..19395
DNA (558bp) protein (186aa)
N-acetyltransferase GCN5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B69E5E
Uncharacterized protein {ECO:0000313|EMBL:KFN43583.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
putative N-acetyltransferase
scnpilot_p_inoc_scaffold_829_16
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19570..20472
DNA (903bp) protein (301aa)
Multidrug DMT transporter permease n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S030_9RALS rbh
Multidrug DMT transporter permease {ECO:0000313|EMBL:EPX97502.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
hypothetical protein
scnpilot_p_inoc_scaffold_829_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20749..23493)
DNA (2745bp) protein (915aa)
Zinc protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W778_9GAMM
Peptidase M16 {ECO:0000313|EMBL:GAN45084.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
peptidase M16
scnpilot_p_inoc_scaffold_829_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23667..24365
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=mine drainage metagenome RepID=T1AKP7_9ZZZZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM53188.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daeje
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_829_19
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24367..24861)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YA19_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO78923.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
scnpilot_p_inoc_scaffold_829_20
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24973..25437
DNA (465bp) protein (155aa)
TrmH family RNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B0714
hypothetical protein
scnpilot_p_inoc_scaffold_829_21
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25690..26235
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T021_XANCT
Activator of XA21-mediated immunity Ax21 {ECO:0000313|EMBL:KGQ17835.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="L
scnpilot_p_inoc_scaffold_829_22
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26801..27433)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003780401
TetR family transcriptional regulator {ECO:0000313|EMBL:GAO36852.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sul
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_829_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27658..28230)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B3FC6
Uncharacterized protein {ECO:0000313|EMBL:GAN45064.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_829_24
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28227..29189)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037716CF
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_829_25

Not on your lists

comp(29269..30000)
DNA (732bp) protein (244aa)
Methyltransferase type 11 {ECO:0000313|EMBL:EQD62064.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD62064.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dr
Methyltransferase type 11 n=1 Tax=mine drainage metagenome RepID=T1C9D6_9ZZZZ
methylase
scnpilot_p_inoc_scaffold_829_26
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30181..31692)
DNA (1512bp) protein (504aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; O
glpD; Aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3C0A7_9BURK rbh
scnpilot_p_inoc_scaffold_829_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31813..32208)
DNA (396bp) protein (132aa)
UPF0225 protein UU9_09672 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ04_9GAMM
UPF0225 protein UU9_09672 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
hypothetical protein
scnpilot_p_inoc_scaffold_829_28
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32282..32500)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003821493
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF45868.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_829_29
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32749..33093)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIW3_9GAMM
EF hand domain-containing protein {ECO:0000313|EMBL:AKC88300.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Ps
hypothetical protein
scnpilot_p_inoc_scaffold_829_30
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33090..34352)
DNA (1263bp) protein (421aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX68_9GAMM
MFS transporter {ECO:0000313|EMBL:GAN45570.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedim
arabinose efflux permease family protein
Displaying items 1-30 of 44 in total

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