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scnpilot_p_inoc_scaffold_12_18

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(23203..24672)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FA87EA similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 472.0
  • Bit_score: 493
  • Evalue 2.30e-136
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 472.0
  • Bit_score: 493
  • Evalue 8.60e-137
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:AEF92745.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 472.0
  • Bit_score: 493
  • Evalue 4.30e-136

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGACGCAGCCGCAGGCCAGGACCATTGCCGCAGGCTCCCTTCCGCCGCAGCCCATCCGGCGCACCGCCGTGCTCGCCGCCGTGCTGACGGCCGTGCTGGCCGGCTGCGTACCGGCCCTGCCGCGCACCGATCCGCCGGCGCCGCCGCCGGCCGCCTGGCCTGCCGACACGACCGTGCGGAGCGAAGCAAGCCGGCCGCTACCCGCCTGGCCCGACTATTTCACCGACCCGACGATGCAGGCGCTGATCCGCACCGCGCTGGCACACAACGCCGACCTGCGCATCGCCGCCGCACGCGTGCAGCAGGCCCAGGCAGCCGCGCAGATCCGGCGCGCGGAACAGACGCCGCTGCTCGCCGGCGGCCTCGACGCCACCCGCCTGGGGCTGCCTGAGGCGCTGCAGCCGCTGGCCGGCGGCCGGGTGCTGCAGAACTACAGCGTGACCCTCGGCGCGAGCAGCTGGGAGCTCGATCTGTGGGGCCGCGTGCGCGACCTGAAGCAGGCCGCGCTGGAGAACTATCTCGCCGGCGACGCCGCCCGGCACGCGGTCCGCGTCGCACTCGTGGCGCAGGTCGCCGCGGCCTGCCTCGCGCTGCGCGAAAGCGACGAGCGCATCGCATTGACCGCGCAGACCATCGCCAGCCGCGAAGCCTCGCTGCGCATCGTCGCACGCCGCGTCGAGGTCGGTTCGGCCTCGCGTCTGCAACTGACCCAGGTCGAAACCCTGCTGATCCAGGCCCAGGCGCTGGGCGCGCAGCTGCAGCAGACTCGCGCGGCCCAGGCCCATGCACTGCAGCAGTTGCTGGGTACGAACGACCCGCCGCCCACGCCGCTACCGGCCGCCGCGGCGACGCTCGCGCCGCTGCAGCCGGAACTGCCCTCGTCCCTGCTGTCGGCTCGCCCGGACATCATGGCTGCCGAGCATCAGCTGCGCGCGGCACAGGCGGACGTCGCGGCCGCACGCGCCGCGTTCTTCCCGCGCGTCACCCTGACCGGCCTGCTCGGCAGCGGCAGCGAGGAGCTCGGCGGCCTGTTCGACAGCGGCACCGGCGTCTGGCTGTTCCGTCCCTCGCTGAGCCTGCCTATCTTCGACGCGGGCCGCCGCCGCGCCAATCTGGACCTGAACGCCGCGCGCGAGGTCGAAGCCGTCGCCGCCTACGAGAAGACCGTGCAGAACGCGTTCCGCGAAGTCGCCGACGCGCTGTCGGCGCGCGACTGGCTGACGCGCCAGCTCGCGATCGCCGAGCGCGGCGTGGCCGTGCTGGAAGAACGTGCGCGGCTGGCCACGCTGCGCTACGACGCGGGCGCGGCGGCCTATCTCGAGGTCCTCGACGCGCAGCGCGACCTGCTCGGCGCGCAGCAGCAGCTCGTCAGCGCGCGCCGCGCGCTGGCCGCGAGCCAGGTCGCGCTGTACGCCGCCCTCGGCGGCGGCTCCGACGTTTCCGACACTTCCCCACGGCAGTCGCGATGA
PROTEIN sequence
Length: 490
MTQPQARTIAAGSLPPQPIRRTAVLAAVLTAVLAGCVPALPRTDPPAPPPAAWPADTTVRSEASRPLPAWPDYFTDPTMQALIRTALAHNADLRIAAARVQQAQAAAQIRRAEQTPLLAGGLDATRLGLPEALQPLAGGRVLQNYSVTLGASSWELDLWGRVRDLKQAALENYLAGDAARHAVRVALVAQVAAACLALRESDERIALTAQTIASREASLRIVARRVEVGSASRLQLTQVETLLIQAQALGAQLQQTRAAQAHALQQLLGTNDPPPTPLPAAAATLAPLQPELPSSLLSARPDIMAAEHQLRAAQADVAAARAAFFPRVTLTGLLGSGSEELGGLFDSGTGVWLFRPSLSLPIFDAGRRRANLDLNAAREVEAVAAYEKTVQNAFREVADALSARDWLTRQLAIAERGVAVLEERARLATLRYDAGAAAYLEVLDAQRDLLGAQQQLVSARRALAASQVALYAALGGGSDVSDTSPRQSR*