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scnpilot_p_inoc_scaffold_12_19

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 24814..25428

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBT5_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 213.0
  • Bit_score: 136
  • Evalue 3.00e-29
Transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 209.0
  • Bit_score: 136
  • Evalue 6.50e-30
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDM25017.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 209.0
  • Bit_score: 136
  • Evalue 3.30e-29

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGAACGATACGGTGGTCCGCAAGCGGGTCAGGCTCGCGCCCGCGCAGCGCTGCGAGCTGATCCTCGATGCGGCGCTGACGGAGTTTTCCGCGCACGGCTATGCGGCCGCGCGCATCGAAGACATCGCGCGCCGCGCCGGCCTGTCCAAGGCCGGCGTCTATGCGCACTATGCGAGCAAGGACGCGATCTTCGAAGCGCTGTTCAACAGGCTGCTGAGCTCCCCGGCGGCCGAGCCGTCCGGCGAACTGCGCGATCAGGCCGATCTGGAGGCTGCGGTCGAGCGTTTCCTCGACCGCGTCTACGCGCGCCTGGGCGACCCGGCGCTCGCCGCCATCTTCCGCCTGCTGATCAGCGAGGGCAGCCGCATGCCCGAATTCATGCGCGCCTGGCGCAGCGGCGTGCTCTGGCCCCACCTGCACGCGCACGAACCGCTGCTGGCGCGGCTGCAGGCCGGCCGCATCGGCGAGTCCATCGAACTGGCCTACTCGCCGATGCTGCACGCGCTGATGCGGCACCTCGTGTTCGGCGACGGCCTGGACGAGATCGCGACGGCGCCGATCCGCCGCGCCCACCGCCGTCTGCTGCTCGCGCTGCTCGGCGATGCCGTGCGCTAA
PROTEIN sequence
Length: 205
MNDTVVRKRVRLAPAQRCELILDAALTEFSAHGYAAARIEDIARRAGLSKAGVYAHYASKDAIFEALFNRLLSSPAAEPSGELRDQADLEAAVERFLDRVYARLGDPALAAIFRLLISEGSRMPEFMRAWRSGVLWPHLHAHEPLLARLQAGRIGESIELAYSPMLHALMRHLVFGDGLDEIATAPIRRAHRRLLLALLGDAVR*