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scnpilot_p_inoc_scaffold_12_122

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(170429..170998)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 180.0
  • Bit_score: 156
  • Evalue 3.40e-35
ECF subfamily RNA polymerase sigma-24 factor Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 180.0
  • Bit_score: 156
  • Evalue 4.80e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 182.0
  • Bit_score: 139
  • Evalue 9.40e-31

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCCGCCACCGCCGCCGCCCGCCCTGACCGATCTGCTGCGCCACTGGAAGGACGGCGAAGGCGCGGCATTCCATCGCGTCGTCGATCTGGCCTATGACCAGCTCAAGCAGATCGCCGTGCAGCGGCTGCGCAACCGCAGTCAGGCCGTCACCCTGACGCCGACCGAATTGCTGCACGACGCACTGCTGCGCGTGGCCGATGCGCCGCGCGACTGGAAGGACCGTGCGCACTTCTTCGCGACGATGTCGCTATACATCCGCTCCACCCTCGTCGACCACGCGCGCGCGCGCAGCAGCGCCAAGCGCGGCGAGGCGGCGGTCGGCGTCAGCCTGTCGCTGATCGACAGCGGCGAGCCGTCGATGGCGGCGGAACTGCTGGCCTTCGACCAGGCCCTGAACCGCCTCGACACGCTGGATCCGCGCGGCGCCCAGGTGCTGCACCTGACCTATTTCGCCGGCCTGGACCGCGAGCAGATCGCCGCGGTGCTCGGCGTGTCGCTGTCCTCGGTCGACCGCGACCTGCGCTTCACGCGCGCCTGGCTGCGCGGAGAGCTCGGCCTTGGAGGCTGA
PROTEIN sequence
Length: 190
MPPPPPPALTDLLRHWKDGEGAAFHRVVDLAYDQLKQIAVQRLRNRSQAVTLTPTELLHDALLRVADAPRDWKDRAHFFATMSLYIRSTLVDHARARSSAKRGEAAVGVSLSLIDSGEPSMAAELLAFDQALNRLDTLDPRGAQVLHLTYFAGLDREQIAAVLGVSLSSVDRDLRFTRAWLRGELGLGG*