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scnpilot_p_inoc_scaffold_12

Search features with annotation key words

Displaying items 121-150 of 466 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_12_121
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167683..170439)
DNA (2757bp) protein (919aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FAA29
Uncharacterized protein {ECO:0000313|EMBL:AKC87484.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
protein kinase
scnpilot_p_inoc_scaffold_12_122
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170429..170998)
DNA (570bp) protein (190aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
ECF subfamily RNA polymerase sigma-24 factor Tax=GWF1_Xanthomonadales_69_6_curated
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_p_inoc_scaffold_12_123
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171083..171676)
DNA (594bp) protein (198aa)
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Putative pseudouridine methyltransferase id=2536509 bin=GWF1_Xanthomonadales_69_6 species=Photobacterium sp. AK15 genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_12_124
Pseudomonas sp. GM18, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172009..173304
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM18 RepID=J2NRV7_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM13479.1}; TaxID=1144324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
scnpilot_p_inoc_scaffold_12_125
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173565..174578
DNA (1014bp) protein (338aa)
Sigma 54-dependent transcriptional activator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY0_9GAMM rbh
Sigma 54-dependent transcriptional activator {ECO:0000313|EMBL:EIL92421.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_p_inoc_scaffold_12_126
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174835..178467
DNA (3633bp) protein (1211aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E5018
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ADX44575.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_12_127
unknown

Not on your lists

178484..180040
DNA (1557bp) protein (519aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_128
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180275..182551
DNA (2277bp) protein (759aa)
UPI0003D00707 related cluster n=1 Tax=unknown RepID=UPI0003D00707 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ06299.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
exported protein of unknown function
scnpilot_p_inoc_scaffold_12_129
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182642..183070)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4YNB2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJO31918.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piec
scnpilot_p_inoc_scaffold_12_130

Not on your lists

comp(183241..183957)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BP16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD75747.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_12_131
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184007..184885)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376970
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16299.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
scnpilot_p_inoc_scaffold_12_132
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184882..187626)
DNA (2745bp) protein (915aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395BA15 rbh
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16300.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
hypothetical protein
scnpilot_p_inoc_scaffold_12_133
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187726..188676
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJ47_STRM5
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACF50215.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotropho
scnpilot_p_inoc_scaffold_12_134
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188673..192770
DNA (4098bp) protein (1366aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P8F8_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI76937.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp
scnpilot_p_inoc_scaffold_12_135
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192829..195243)
DNA (2415bp) protein (805aa)
Putative transmembrane protein n=2 Tax=Legionella longbeachae RepID=D3HSQ2_LEGLN
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG58533.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LL
scnpilot_p_inoc_scaffold_12_136
unknown

Not on your lists

195942..196172
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_137
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

196284..196622
DNA (339bp) protein (113aa)
DGPFAETKE domain protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000368E255
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KES08535.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
scnpilot_p_inoc_scaffold_12_138
unknown

Not on your lists

197032..197958
DNA (927bp) protein (309aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_139
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198013..198774)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000374F4AD
LuxR family transcriptional regulator {ECO:0000313|EMBL:EYS85912.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_12_140
unknown

Not on your lists

comp(198904..199590)
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_141
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(199735..206718)
DNA (6984bp) protein (2328aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B30E31 rbh
multicopper oxidase type 2 Tax=GWF2_Lentisphaerae_50_93_curated
fibronectin type III domain-containing protein
scnpilot_p_inoc_scaffold_12_142
unknown

Not on your lists

comp(206715..207191)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_143
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207945..208472
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC85_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97076.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_12_144
unknown

Not on your lists

208525..208869
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_145
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208798..217233)
DNA (8436bp) protein (2812aa)
Glycosyltransferase 36 n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSD5_ALLVD rbh
putative glycosyltransferase 36 Tax=RBG_16_Betaproteobacteria_66_20_curated
glycosyltransferase
scnpilot_p_inoc_scaffold_12_146
unknown

Not on your lists

comp(217441..217836)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_147
Pseudomonas rhizosphaerae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218378..219016
DNA (639bp) protein (213aa)
Transporter n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B4H8_9PSED
transporter
Transporter {ECO:0000313|EMBL:AIS18784.1}; TaxID=216142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas rhizosphaerae.;"
scnpilot_p_inoc_scaffold_12_148
unknown

Not on your lists

219061..219639
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_149
unknown

Not on your lists

comp(219741..219929)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_12_150
unknown

Not on your lists

comp(220793..221245)
DNA (453bp) protein (151aa)

This feature has no annotations

Displaying items 121-150 of 466 in total

View Taxonomy