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scnpilot_p_inoc_scaffold_12_147

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 218378..219016

Top 3 Functional Annotations

Value Algorithm Source
Transporter n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B4H8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 181.0
  • Bit_score: 92
  • Evalue 5.20e-16
transporter similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 161.0
  • Bit_score: 94
  • Evalue 5.10e-17
Transporter {ECO:0000313|EMBL:AIS18784.1}; TaxID=216142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas rhizosphaerae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 161.0
  • Bit_score: 94
  • Evalue 2.50e-16

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Taxonomy

Pseudomonas rhizosphaerae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAACCTGTCCCACTCGTCATCGCCAACCCGTAGTCTCATCGCCCTCGCGCTTGCGCTTGCGCTCTTCGGCAGTTTCGCGGCAGGCGCGACCGAGGCGCAGCCGTCCACGCCCTGCGAGACTTTGATGGGCGACGCAAACGTCACCGCCGCGATCGAATCGCGCCTGAGGGAAACCTCCCGCATCCAGGCGGACGACATCGCCGTCGTCGTCGTGTCCGGCGTAGTTGAGCTGCGCGGAGTGGTGCGCAGCGACGCGCAAAAGCTCCTGGCCGAGCAGATGACGCGCGACACCAGAGGCGTGGACCATCTCTACAATCAGCTCGACGTGGTCGGCTGGGTTCCCGTCACCGATTTCGCTCGCGCACAGGCCTCGCGGCGCGAGGACATCGACCGGTCGCGTCAGATACGCAGCGACACCTGGATCACGACGGCGGTCGAAAACACACTGGCGCTGTCACGCAGCACCGACAACTGCCGGATCATCGTCCACACCCGTGACGGCGCCGTCGTGCTGCAGGGCGTCGTGGCCACGGCCGAGGCACGCCGCATGGCAGTCGAGCTTGCCGCCGGCACTCATGGCGTGCGCAGCGTCGACGCCGCCGCCTTGCTGCTGCCGGGCGGCGCGATGGCGCACTGA
PROTEIN sequence
Length: 213
MNLSHSSSPTRSLIALALALALFGSFAAGATEAQPSTPCETLMGDANVTAAIESRLRETSRIQADDIAVVVVSGVVELRGVVRSDAQKLLAEQMTRDTRGVDHLYNQLDVVGWVPVTDFARAQASRREDIDRSRQIRSDTWITTAVENTLALSRSTDNCRIIVHTRDGAVVLQGVVATAEARRMAVELAAGTHGVRSVDAAALLLPGGAMAH*