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scnpilot_p_inoc_scaffold_44_19

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 7958..8311

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM87_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 117.0
  • Bit_score: 179
  • Evalue 1.80e-42
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 117.0
  • Bit_score: 179
  • Evalue 2.50e-42
LSU ribosomal protein L18P similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 117.0
  • Bit_score: 178
  • Evalue 1.50e-42

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGGAAAAGAAAACTTCCCGCTTGCGCCGCGCCAAGTCGACGCGCGCTCGCATCCGCACCCTCGCGGTGGCCCGCCTGACCGTGCATCGCACGGGCCAGCACATCTATGCCCAGGTCATTGCTCCGTCGGGCGACAAGGTCATTGCCGCGGCTTCGACCCTGCAGGACTCGGTGATCGAGGGCCTCAAGGGCACGAAGAACAAGGCCGCCGCCGCGGCGGTCGGCAAGGCTGTCGCCGAGCGCGCCAAGGCCGCCGGCGTCGAATCGGTCGCGTTCGACCGTTCGGGCTTCAAGTATCACGGTCGCATCCAGGCCCTGGCCGATGCGGCGCGCGAGGCTGGCCTCAAGTTCTAA
PROTEIN sequence
Length: 118
MEKKTSRLRRAKSTRARIRTLAVARLTVHRTGQHIYAQVIAPSGDKVIAAASTLQDSVIEGLKGTKNKAAAAAVGKAVAERAKAAGVESVAFDRSGFKYHGRIQALADAAREAGLKF*