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scnpilot_p_inoc_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_44_1
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..114
DNA (114bp) protein (38aa)
tuf2; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=EFTU_HAHCH
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellac
scnpilot_p_inoc_scaffold_44_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


358..669
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=11 Tax=Stenotrophomonas RepID=RS10_STRM5
30S ribosomal protein S10
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_44_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


703..1344
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL69_9GAMM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
LSU ribosomal protein L3P
scnpilot_p_inoc_scaffold_44_4
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1356..1961
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYK4_FRAAD
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria auran
scnpilot_p_inoc_scaffold_44_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1958..2248
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B792AD
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
rplW; 50S ribosomal protein L23
scnpilot_p_inoc_scaffold_44_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2306..3088
DNA (783bp) protein (261aa)
50S ribosomal protein L2 n=1 Tax=Rudaea cellulosilytica RepID=UPI000360E4AE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter ca
50S ribosomal protein L2
scnpilot_p_inoc_scaffold_44_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3101..3379
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E0658
30S ribosomal protein S19
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_44_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3391..3726
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F86420
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Sten
scnpilot_p_inoc_scaffold_44_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3744..4451
DNA (708bp) protein (236aa)
Small subunit ribosomal protein S3 n=2 Tax=Xanthomonas RepID=V7ZHI6_9XANT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudox
SSU ribosomal protein S3P
scnpilot_p_inoc_scaffold_44_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4454..4867
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Dyella japonica RepID=UPI000305A51A
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
scnpilot_p_inoc_scaffold_44_11
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4867..5052
DNA (186bp) protein (62aa)
50S ribosomal protein L29 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ3_PSEUP
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseud
scnpilot_p_inoc_scaffold_44_12
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5064..5327
DNA (264bp) protein (88aa)
30S ribosomal protein S17 id=2431961 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Are
rpsQ; 30S ribosomal protein S17
scnpilot_p_inoc_scaffold_44_13
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5350..5718
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ1_PSEUP
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pse
scnpilot_p_inoc_scaffold_44_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5732..6046
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Dyella ginsengisoli RepID=UPI0003453922
ribosomal protein L24, bacterial/organelle Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ribosomal protein L24, bacterial/organelle
scnpilot_p_inoc_scaffold_44_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6058..6597
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4DF36
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas or
ribosomal protein L5
scnpilot_p_inoc_scaffold_44_16
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6615..6920
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000373523B
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
30S ribosomal protein S14
scnpilot_p_inoc_scaffold_44_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6961..7356
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK2_9GAMM
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
scnpilot_p_inoc_scaffold_44_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7370..7897
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK3_9GAMM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
LSU ribosomal protein L6P
scnpilot_p_inoc_scaffold_44_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7958..8311
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM87_9GAMM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
LSU ribosomal protein L18P
scnpilot_p_inoc_scaffold_44_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8456..8968
DNA (513bp) protein (171aa)
30S ribosomal protein S5 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C498F
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
30S ribosomal protein S5
scnpilot_p_inoc_scaffold_44_21
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8958..9155
DNA (198bp) protein (66aa)
50S ribosomal protein L30 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYM1_FRAAD
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frat
scnpilot_p_inoc_scaffold_44_22
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9181..9615
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Rudaea cellulosilytica RepID=UPI000364F998
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Are
50S ribosomal protein L15
scnpilot_p_inoc_scaffold_44_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9620..10930
DNA (1311bp) protein (437aa)
preprotein translocase subunit SecY n=1 Tax=Dyella japonica RepID=UPI00031E446A
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
scnpilot_p_inoc_scaffold_44_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11068..11424
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL48_9GAMM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
30S ribosomal protein S13
scnpilot_p_inoc_scaffold_44_25
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11443..11835
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=4 Tax=Xanthomonas RepID=D2UBJ4_XANAP
rpsK; 30S ribosomal protein S11
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_44_26
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11847..12473
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B75DD4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas me
rpsD; 30S ribosomal protein S4
scnpilot_p_inoc_scaffold_44_27
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12492..13487
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rudaea cellulosilytica RepID=UPI0003710C20 rbh
scnpilot_p_inoc_scaffold_44_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13519..13902
DNA (384bp) protein (128aa)
50S ribosomal protein L17 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL3_9GAMM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
rplQ; 50S ribosomal protein L17
scnpilot_p_inoc_scaffold_44_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14114..14641
DNA (528bp) protein (176aa)
Disulfide bond formation protein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL43_9GAMM
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria;
disulfide bond formation protein DsbB
scnpilot_p_inoc_scaffold_44_30
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14733..16133
DNA (1401bp) protein (467aa)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Dyella ginsengisoli RepID=UPI0003449E0F
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KGQ19475.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source
phospho-2-dehydro-3-deoxyheptonate aldolase
Displaying items 1-30 of 427 in total

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