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scnpilot_p_inoc_scaffold_44

Search features with annotation key words

Displaying items 91-120 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_44_91
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102791..103264
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000366CC2D
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_44_92
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103395..103946
DNA (552bp) protein (184aa)
rimL; acetyltransferase (EC:2.3.1.-)
Ribosomal-protein-serine acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRV6_9GAMM
Ribosomal-protein-serine acetyltransferase {ECO:0000313|EMBL:EIL89947.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
scnpilot_p_inoc_scaffold_44_93
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103956..104378)
DNA (423bp) protein (141aa)
thioesterase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AD43
Thioesterase {ECO:0000313|EMBL:KGM52316.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07
thioesterase
scnpilot_p_inoc_scaffold_44_94
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104378..107224)
DNA (2847bp) protein (949aa)
excinuclease ABC subunit A n=1 Tax=Rudaea cellulosilytica RepID=UPI0003772EE0 rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit A
scnpilot_p_inoc_scaffold_44_95
unknown

Not on your lists

107764..108333
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_96
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


108470..108784
DNA (315bp) protein (105aa)
Ribosomal protein L21 n=1 Tax=mine drainage metagenome RepID=T0ZLA0_9ZZZZ
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lute
rplU; 50S ribosomal protein L21
scnpilot_p_inoc_scaffold_44_97
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


108803..109060
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D3A8B
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas c
rpmA; 50S ribosomal protein L27
scnpilot_p_inoc_scaffold_44_98
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109181..110230
DNA (1050bp) protein (350aa)
GTPase CgtA n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B6458
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo
obgE; GTPase CgtA
scnpilot_p_inoc_scaffold_44_99

Not on your lists


comp(110345..110608)
DNA (264bp) protein (88aa)
Ribosomal protein S20 n=1 Tax=mine drainage metagenome RepID=T1AX22_9ZZZZ
Ribosomal protein S20 {ECO:0000313|EMBL:EQD63348.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SSU ribosomal protein S20P
scnpilot_p_inoc_scaffold_44_100
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110874..112481
DNA (1608bp) protein (536aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B37180 rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimon
membrane protein
scnpilot_p_inoc_scaffold_44_101
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112511..113461
DNA (951bp) protein (317aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1543381 species="Bacteria; Proteobacte
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BB87F
riboflavin kinase/FMN adenylyltransferase
scnpilot_p_inoc_scaffold_44_102
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113465..116413
DNA (2949bp) protein (983aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365FD79 rbh
scnpilot_p_inoc_scaffold_44_103
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116413..116931
DNA (519bp) protein (173aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
peptidase A8
Lipoprotein signal peptidase id=2579545 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas campestris genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_p_inoc_scaffold_44_104
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116965..117915
DNA (951bp) protein (317aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619F2F rbh
scnpilot_p_inoc_scaffold_44_105
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118138..118710
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003665BA6
general secretion pathway, GspH
General secretion pathway, GspH {ECO:0000313|EMBL:ADX47363.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ave
scnpilot_p_inoc_scaffold_44_106

Not on your lists

118713..119228
DNA (516bp) protein (172aa)
Pilus modification type IV, PilV n=1 Tax=mine drainage metagenome RepID=T1A938_9ZZZZ
Pilus modification type IV, PilV {ECO:0000313|EMBL:EQD38360.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
type IV pilus modification protein PilV
scnpilot_p_inoc_scaffold_44_107

Not on your lists

119225..120583
DNA (1359bp) protein (453aa)
Type IV pilus assembly protein PilW n=1 Tax=mine drainage metagenome RepID=T1C0B2_9ZZZZ
Type IV pilus assembly protein PilW {ECO:0000313|EMBL:EQD38359.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_44_108

Not on your lists

120596..121279
DNA (684bp) protein (228aa)
Type IV pilus assembly protein PilX n=1 Tax=mine drainage metagenome RepID=T1BWK3_9ZZZZ
Type IV pilus assembly protein PilX {ECO:0000313|EMBL:EQD74272.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_44_109

Not on your lists

121325..125002
DNA (3678bp) protein (1226aa)
Type 4 fimbrial biogenesis protein PilY1 n=1 Tax=mine drainage metagenome RepID=T0ZA38_9ZZZZ
Type 4 fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:EQD41918.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_44_110
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125060..125506
DNA (447bp) protein (149aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4L4_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:KJV30301.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_p_inoc_scaffold_44_111
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(125886..127391)
DNA (1506bp) protein (502aa)
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBL1_SINAD
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA26041.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila
scnpilot_p_inoc_scaffold_44_112
unknown

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127734..128117
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_113
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128211..129170)
DNA (960bp) protein (320aa)
cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cysteine synthase (EC:2.5.1.47)
cysteine synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI000369A615 rbh
scnpilot_p_inoc_scaffold_44_114
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129261..133643)
DNA (4383bp) protein (1461aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003766B53 rbh
putative glycosyltransferase Tax=GWF1_Xanthomonadales_69_6_curated
putative glycosyltransferase
scnpilot_p_inoc_scaffold_44_115
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133864..136161
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371F9EA rbh
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR00
penicillin-binding protein 1B
scnpilot_p_inoc_scaffold_44_116
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136212..136748
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02355.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_44_117
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136753..138660
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003783568 rbh
helicase
Helicase {ECO:0000313|EMBL:AHX14475.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_44_118
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

139019..141913
DNA (2895bp) protein (965aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BF3B7
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
peptidase S8 family protein
scnpilot_p_inoc_scaffold_44_119
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142171..142503)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI77631.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
scnpilot_p_inoc_scaffold_44_120
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142691..144019
DNA (1329bp) protein (443aa)
Inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S6_9GAMM rbh
Inner membrane protein {ECO:0000313|EMBL:EIL94467.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
Inner membrane protein involved in colicin E2 resistance
Displaying items 91-120 of 427 in total

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