ggKbase home page

scnpilot_p_inoc_scaffold_44_111

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(125886..127391)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBL1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 493.0
  • Bit_score: 452
  • Evalue 6.10e-124
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 493.0
  • Bit_score: 452
  • Evalue 1.70e-124
PAS domain S-box {ECO:0000313|EMBL:AGA26041.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 493.0
  • Bit_score: 452
  • Evalue 8.60e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1506
GTGACTCCGAAGGCGCCCATCCCACCGCTGGATCCGGCCTGCTGGCTCGCCGCGATCGTGGCCTCCTCGCAGGACGCGATCGTCAGCAAGACCGTCGACGGCATCATCACCTCGTGGAACGCGAGCGCCGAGCGTCTGTACGGCTATACGGCCGACGAGGCCATAGGTCGCTCCATCCTGCTGATCATTCCCGAGCACCTGCGCGAAGAAGAGCAGGAAATCCTGCGCCGCATCGCTGCGGGCCGTCGCGTCGAACACTTCGAGACCGAGCGCCGCGCCAAGGACGGCCGTCTGGTCCCGGTCTCGCTGACCGTGTCGCCGGTGTTCGACGCCGACAACCGCATCGTCGGGGCCTCGAAGATCGCGCGCGACATCAGCGAACGCCGCGCCACCGAGGAACGGCTGCGCACCGCCGACCGGCGCAAGGATGAATTCCTGGCCATGCTCGGCCACGAGTTGCGCAATCCGCTGGCGCCGGTGCTCAGCGCCGTGGAGATCCTGCGCCGCAAGACCGCGGCGCAGGCGGATCTGCAGGAACTCTGCGCGGTGCTTGGCCGCCAGGTCGGCCAGATGGCTCGGCTGCTCGACGATCTGCTCGATGTCAGCCGCATTTCCTCGGGCAAGGTCGTCCTGCGCCTGGAGCCGCTGGATCTGCGCGATGCGATCGCGCGCGCGGTCGAAGCCCTGCAGCCGGCGATGGACCAGCGCGGCCATCGGCTGAGCATCGTGCTGCCGCCGGCAGCGCTGCCCGTGCGCGGCGATCCGACGCGACTGGTGCAACTGCTGTCGAATCTTCTCAACAATGCGGCGAAATACACTCCGGACGGCGGCCGCATCACGGTAACGGCCGAATGCGCCGGCGAGGAGATCCGCGTACAGGTTGCCGATACCGGACTGGGCATGTCCGCGCAGTTGCTCGAAGGCATCTTCGATCTGTTCGTGCAGGGCGAAAGCACGATGGACCGTGCCGAAGGCGGCCTGGGCCTGGGCCTCACGCTCGCGCGCGGCATCGTCGAACGCCACGGCGGACGCATCACCGCCTGCAGCGACGGCGTGGGGCTCGGCAGCCGCTTCGTCGTGACCTTGCCGCGCTTCCACGAACCCGAGCCGGCATCGACGGCGGCCGACATCGCCGGCAGCCCGGAGCCTGCGGTGCGGCGCGTGCTCATCGTCGACGACAACGCGGACTCGGCCCGGCTCATGGCCGAGCTCATACGTACGCTCGGCCACGAGGTCGAGGCGCTGACCGAGCCCGAAGACGCCGTCGCGACGATCCTGCAGCAGCAGCCGGATGTGGTGTTCCTCGACATCGGCCTGCCCGGCGTCAGCGGCTACGACATCGCCGCCGCCGTACGCGAACGCGGCTTTCGCCGCCAGCTCGTCGCGGTGACCGGTTACGGCCAGCCCGCCGACCGCGCGCGTTCGCGCGAGGCCGGCTTCGACCTGCACTGGGTCAAACCGGTGGAACCGCGGCGACTGGAAGCACTGCTGGCGGCGCGGGGCTGA
PROTEIN sequence
Length: 502
VTPKAPIPPLDPACWLAAIVASSQDAIVSKTVDGIITSWNASAERLYGYTADEAIGRSILLIIPEHLREEEQEILRRIAAGRRVEHFETERRAKDGRLVPVSLTVSPVFDADNRIVGASKIARDISERRATEERLRTADRRKDEFLAMLGHELRNPLAPVLSAVEILRRKTAAQADLQELCAVLGRQVGQMARLLDDLLDVSRISSGKVVLRLEPLDLRDAIARAVEALQPAMDQRGHRLSIVLPPAALPVRGDPTRLVQLLSNLLNNAAKYTPDGGRITVTAECAGEEIRVQVADTGLGMSAQLLEGIFDLFVQGESTMDRAEGGLGLGLTLARGIVERHGGRITACSDGVGLGSRFVVTLPRFHEPEPASTAADIAGSPEPAVRRVLIVDDNADSARLMAELIRTLGHEVEALTEPEDAVATILQQQPDVVFLDIGLPGVSGYDIAAAVRERGFRRQLVAVTGYGQPADRARSREAGFDLHWVKPVEPRRLEALLAARG*