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scnpilot_p_inoc_scaffold_44_348

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(406214..406771)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEF5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 163
  • Evalue 1.60e-37
sigma factor, ECF-like family protein similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 163
  • Evalue 4.50e-38
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:BAH40882.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 163
  • Evalue 2.30e-37

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGCCACTTCCTTCAGATCCAGACGCCGACGATGCCTGCGATGCGCTCGCACCGGCGAGTTCCGGCGAACGGCTGTCACCGCTGCTGTACGCGGAGCTCAAGGCGCTGGCTGCGGGGGCCATGCGCGCCGAACGCGACGACCATACGCTGCAGACCACCGCGCTGGTCAACGAAGCCTGCCTGCGCGTGATCGGGCAACACAGTTTCGATGCGTCCAATCGCGCGCAACTCCTCGGCGTCGCCGCACAGATGATGCGGCGCGTGCTGGTCGATCACGCGCGCCGCCGCACGGCGGCCAAACGACCGACCTCGGACGTGCGCGTCATGATCGAGGAAATAGATCTGCCGGAAGCCGAAGCAGACCTGATCGGTCTGGACGATGCGCTCAGGCGCCTCGCCCGGATCAGCCCGCGCCAGGCACGCGTCGTCGATCTCAAGTTTTTCGCCGGCCTGGAACTCGACGAAATCGCCGACCTTCTCGATGTCGCGAGACCGACCGTCGTACGCGACTGGCGCATGGCGCGCGCATGGCTGCAGCGCGAGCTGGCCGATGCCTGA
PROTEIN sequence
Length: 186
MPLPSDPDADDACDALAPASSGERLSPLLYAELKALAAGAMRAERDDHTLQTTALVNEACLRVIGQHSFDASNRAQLLGVAAQMMRRVLVDHARRRTAAKRPTSDVRVMIEEIDLPEAEADLIGLDDALRRLARISPRQARVVDLKFFAGLELDEIADLLDVARPTVVRDWRMARAWLQRELADA*