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scnpilot_p_inoc_scaffold_44_366

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 430352..430894

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030D5770 similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 177.0
  • Bit_score: 171
  • Evalue 5.80e-40
Membrane protein {ECO:0000313|EMBL:AKC88026.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 181.0
  • Bit_score: 168
  • Evalue 8.90e-39
Bacterial lipocalin similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 165
  • Evalue 2.00e-38

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCGGCACCGGATGAACCCCATCGCTGTCGCCGCCGCGCTGGCGCTGTCCGGCGCGGCGGCCGCGGGCGACGACGTCGCCACCGTGCCTGCCGTCGATCTGCAGCGCTACGCCGGCACCTGGCACGAGCAGGCGCGCCTGCCCAACCGTTTCCAGGAGCAGTGCCGCAGCGACGTCACCGCGACGTACGCCGTGCAGGCCGACGGCACGGTGGAGGTGCGCAATCAATGCCGCGACGCCGACGGCGGCGTCGTCACCGCCGTCGGTCTGGCCGTGGTGGACGATCCGGCGCAACCCGGCCTGCTCCGGGTCACCTTCCTGCCAGCGGGCCTGCGCTGGCTGCCGTTCGGGCATGCGCAATACCGCATCGTCGCGCTGGACCCCGACTACCGCTGGAGCATCGTCGGCGGCGAGGACCGCCGTTACCTGTGGCTGCTGACGCGCAGCCCGCAGATCGACGCGAGCGAGCGCCAGGCGCTGATCGGGCGCGCGCAGGCGCTGGGCTACGACACCACGCGACTGATCGCCAGTCCGCCGCGCTGA
PROTEIN sequence
Length: 181
MRHRMNPIAVAAALALSGAAAAGDDVATVPAVDLQRYAGTWHEQARLPNRFQEQCRSDVTATYAVQADGTVEVRNQCRDADGGVVTAVGLAVVDDPAQPGLLRVTFLPAGLRWLPFGHAQYRIVALDPDYRWSIVGGEDRRYLWLLTRSPQIDASERQALIGRAQALGYDTTRLIASPPR*