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scnpilot_p_inoc_scaffold_48_489

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(625477..625794)

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HQ20_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 103.0
  • Bit_score: 156
  • Evalue 1.90e-35
Multidrug transporter {ECO:0000313|EMBL:ETM68174.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 103.0
  • Bit_score: 156
  • Evalue 2.70e-35
hypothetical membrane protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 150
  • Evalue 2.90e-34

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGTCCTGGTTCCTGTTGTTCCTCGCCGGCCTGTTCGAGATCGGCTGGGCCGTCGGCCTGCGCTACAGCGACGGCTGGACGCGGTTGTGGCCGTCGCTGGCCACCCTGGCCGCGATGGCCGTGAGCTTCGGCCTGCTGTCGCTGGCCCTGCGCGTGCTGCCGCTCGGGACGGCCTATGCGGTATGGACCGGCATAGGTGCGGTCGGCACCGCCGTCGTCGGCATCCTGTTGCTCGGCGAATCGACGAGCCCGCTGCGTCTGGTGTCGATCGCGCTGATCGTGCTGGGCCTGCTCGGTCTGAAGTTCGCCTCGCAGTGA
PROTEIN sequence
Length: 106
MSWFLLFLAGLFEIGWAVGLRYSDGWTRLWPSLATLAAMAVSFGLLSLALRVLPLGTAYAVWTGIGAVGTAVVGILLLGESTSPLRLVSIALIVLGLLGLKFASQ*