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scnpilot_p_inoc_scaffold_548_11

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(11454..12005)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector, Hcp1 family n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JW42_BURP8 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 159.0
  • Bit_score: 156
  • Evalue 1.90e-35
Hcp1 family type VI secretion system effector similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 159.0
  • Bit_score: 156
  • Evalue 5.50e-36
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:ACC75169.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 159.0
  • Bit_score: 156
  • Evalue 2.70e-35

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Taxonomy

Burkholderia phymatum → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCATCTCTCGGAATGGGCAACGTCCTCGCGGCGCCCGCAGTCTCGGTCGACACCGCGCCCAAAGACTCGCAGCAGGACTTCCACCTGAAGATCGACGGCATCACCGGCGAATCCAAGGACTCCAAGCACAGCGGTGAAATCGACGTGCTGAGCTGGGGCTACGCGGTCAGCCAGTCGTCGTCGACCCACACGGGCGGCGGCGGCGGCGTCGGCAAGGCCAACTTCAGTGAGTTCGTGTTCACGCACTATGTGGACAAGGCCACGGCCAATCTCATGAAGTATTGCGCCAGCGGCAAGCACATCGGCCAGGTCGTCCTGTCCTGCAGCAAGGTCGGCGACGGCGCGCAGCAGTACATGACGGTGACCCTGAACGACGTGCTGATCACGCACTCGCGCCCGGTCGGCGCCACCAACAGCCCGCGCGTCATCGAAGAAGTCGGCATGTCCTACGCCAAGATCAAGGTCGAGGTGAAGGAACAGAACGCCGACGGTTCGCTGGGTGCCGCGACCACGGGTGCCTGGGACGTCAAGCAGAACAAGGCGGCCTGA
PROTEIN sequence
Length: 184
MASLGMGNVLAAPAVSVDTAPKDSQQDFHLKIDGITGESKDSKHSGEIDVLSWGYAVSQSSSTHTGGGGGVGKANFSEFVFTHYVDKATANLMKYCASGKHIGQVVLSCSKVGDGAQQYMTVTLNDVLITHSRPVGATNSPRVIEEVGMSYAKIKVEVKEQNADGSLGAATTGAWDVKQNKAA*