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scnpilot_p_inoc_scaffold_548

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Displaying items 1-30 of 93 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_548_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)
Rhs element Vgr protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJG5_ACIAC
Rhs element Vgr protein
Rhs element Vgr protein {ECO:0000313|EMBL:ABM31088.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
scnpilot_p_inoc_scaffold_548_2
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(749..1654)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2U5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCM78552.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
sterol desaturase
scnpilot_p_inoc_scaffold_548_3
unknown

Not on your lists

comp(1877..2524)
DNA (648bp) protein (216aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_548_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2505..3029)
DNA (525bp) protein (175aa)
Putative cytoplasmic protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099M1_STIAD
Putative cytoplasmic protein {ECO:0000313|EMBL:EAU68445.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source
hypothetical protein
scnpilot_p_inoc_scaffold_548_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3052..5829)
DNA (2778bp) protein (926aa)
ATPase AAA n=1 Tax=Variovorax paradoxus RepID=UPI00036BB7E0
type VI secretion ATPase, clpv1 family
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:ADU34788.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
scnpilot_p_inoc_scaffold_548_6
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5923..7005)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002DD1B3D
Uncharacterized protein {ECO:0000313|EMBL:KJK01991.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2
phaF; polyhydroxyalkanoate synthesis protein PhaF
scnpilot_p_inoc_scaffold_548_7
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7054..8121)
DNA (1068bp) protein (356aa)
Type VI secretion protein, VC_A0111 family n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E1X4_9GAMM
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EGV31182.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="T
type VI secretion protein
scnpilot_p_inoc_scaffold_548_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8118..9995)
DNA (1878bp) protein (626aa)
Type VI secretion protein, VC_A0110 family n=1 Tax=Variovorax paradoxus B4 RepID=T1X424_VARPD
type VI secretion protein, VC_A0110 family
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:AGU47363.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
scnpilot_p_inoc_scaffold_548_9
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10001..10522)
DNA (522bp) protein (174aa)
Lysozyme family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ITS0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDE35754.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radic
hypothetical protein
scnpilot_p_inoc_scaffold_548_10
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10515..11336)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FRD0_PELBH
Protein of avirulence locus involved in temperature-dependent protein secretion {ECO:0000313|EMBL:EXI64475.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulib
virulence protein SciE type
scnpilot_p_inoc_scaffold_548_11
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..12005)
DNA (552bp) protein (184aa)
Type VI secretion system effector, Hcp1 family n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JW42_BURP8
Hcp1 family type VI secretion system effector
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:ACC75169.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sou
scnpilot_p_inoc_scaffold_548_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12105..13601)
DNA (1497bp) protein (499aa)
Type VI secretion protein, EvpB/VC_A0108 family n=2 Tax=Delftia RepID=A9BLJ7_DELAS rbh
type VI secretion lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KFJ12929.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseud
scnpilot_p_inoc_scaffold_548_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13628..14176)
DNA (549bp) protein (183aa)
Uncharacterized protein ImpB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH45_9PROT
Uncharacterized protein ImpB {ECO:0000313|EMBL:CCU62621.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
hypothetical protein
scnpilot_p_inoc_scaffold_548_14
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14335..15360)
DNA (1026bp) protein (342aa)
type VI secretion protein ImpA n=1 Tax=Acidovorax avenae RepID=UPI0002EFAD05
Uncharacterized protein {ECO:0000313|EMBL:KGM40351.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
type VI secretion-associated protein, ImpA family
scnpilot_p_inoc_scaffold_548_15
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15421..15870)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002D7CA67
Uncharacterized protein {ECO:0000313|EMBL:KJK02287.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2
putative lipoprotein
scnpilot_p_inoc_scaffold_548_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16076..18970)
DNA (2895bp) protein (965aa)
Serine/threonine protein kinase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARE7_DELSC rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:EZP47605.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT3
serine/threonine protein kinase
scnpilot_p_inoc_scaffold_548_17
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19464..21437
DNA (1974bp) protein (658aa)
Regulatory protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YVI3_9RHOO
Regulatory protein {ECO:0000313|EMBL:ENO95570.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
FHA domain containing protein
scnpilot_p_inoc_scaffold_548_18
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21434..22276
DNA (843bp) protein (281aa)
Putative phosphoprotein phosphatase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTV0_9RHOO
Putative phosphoprotein phosphatase {ECO:0000313|EMBL:ENO95569.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenyl
Protein serine/threonine phosphatase
scnpilot_p_inoc_scaffold_548_19
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22395..22970
DNA (576bp) protein (192aa)
Replication/virulence associated protein putative exported protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R2S0_CUPTR
sciN; replication/virulence associated protein; exported protein
Replication/virulence associated protein putative exported protein {ECO:0000313|EMBL:CAQ68601.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
scnpilot_p_inoc_scaffold_548_20
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23013..24347
DNA (1335bp) protein (445aa)
Type VI secretion protein, VC_A0114 family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q330_ACIAP rbh
type VI secretion protein
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:ADX45432.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_p_inoc_scaffold_548_21
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24590..25882
DNA (1293bp) protein (431aa)
Type IV / VI secretion system protein, DotU family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q331_ACIAP rbh
DotU family type IV / VI secretion system protein
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:ADX45433.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
scnpilot_p_inoc_scaffold_548_22
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25882..29481
DNA (3600bp) protein (1200aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I7V0_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44450.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_548_23
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29481..30074
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00036B4CEE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJX12271.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubon
scnpilot_p_inoc_scaffold_548_24
unknown

Not on your lists

comp(30579..31127)
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_548_25
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31321..32418
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J1L6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ16147.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
nucleotidyltransferase
scnpilot_p_inoc_scaffold_548_26
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32415..33176
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0003178262
Nucleotidyltransferase {ECO:0000313|EMBL:EYR68881.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_p_inoc_scaffold_548_27
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33238..33924)
DNA (687bp) protein (229aa)
RNA ligase domain, REL/Rln2 n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZHD9_9PROT
RNA ligase domain, REL/Rln2
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_p_inoc_scaffold_548_28
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33914..34453)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00035F7F73
Uncharacterized protein {ECO:0000313|EMBL:EXI90620.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
scnpilot_p_inoc_scaffold_548_29
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34450..35826)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BVJ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXI90619.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
scnpilot_p_inoc_scaffold_548_30
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36075..36422)
DNA (348bp) protein (116aa)
cupin n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F9322E
tetracenomycin polyketide synthesis protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
tetracenomycin polyketide synthesis protein
Displaying items 1-30 of 93 in total

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