ggKbase home page

scnpilot_p_inoc_scaffold_548_27

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(33238..33924)

Top 3 Functional Annotations

Value Algorithm Source
RNA ligase domain, REL/Rln2 n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZHD9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 226.0
  • Bit_score: 296
  • Evalue 2.00e-77
RNA ligase domain, REL/Rln2 similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 226.0
  • Bit_score: 296
  • Evalue 5.50e-78
Tax=BJP_IG2103_Dechloromonas_60_92 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 222.0
  • Bit_score: 299
  • Evalue 3.20e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2103_Dechloromonas_60_92 → Dechloromonas → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGAAAATGATCCGTTTTTCCGCTTTCCTCATACGCCGCACCTGGCCTGGCTCGGCAGGGGCACGCCGCGCGACGACAAGGTGCTGTCGCCGGCCGATGCCGCCGGACTGCTGGCCGGCGATGTCGTGATCGAGGAAAAGCTCGACGGCGCCAACCTGGGGTTGTCGCTCGACGGGGAAGGACGGCTGCGCTCGCAAAATCGCGGCCATTATCTGCATGCGCCGTTCGGCGGCCAGTTCGCCCGCCTGCCGGACTGGCTGGCGATGCACGAGGAACGGCTTGCCGCATGCCTGAACCCTACGCTGATCGCGTTCGGGGAGTGGTGCGCGGCGCAGCATTCATTGGACTACGACGCGCTGCCGGACTGGTGGCTGCTTTTCGACGTCTATGATCGCGAACGCGGTTGTTTCTGGAGTACCGCTCGCAGGGACGCCTGGGCGGAGCAGGCCGGTGTCGCCACGGTGAAGCGTGTGGCTCGCGGGCGATTCAGCCAGCCCGCGTTGAAGGCCTTGCTGCAAGACGCCCGGAGCAGCTATCGCGGCGGTCCGATGGAGGGCATCGTCGTCCGTGCCGAGACGGAAGAGATACTGGTTGCGCGCGCGAAACTGGTCCGGGCCGATTTCGCACAGAGCATCGAGGAACACTGGCGCAGCCGTCCCCTGCACTGGAACCGGCTCGGCGACTGA
PROTEIN sequence
Length: 229
MENDPFFRFPHTPHLAWLGRGTPRDDKVLSPADAAGLLAGDVVIEEKLDGANLGLSLDGEGRLRSQNRGHYLHAPFGGQFARLPDWLAMHEERLAACLNPTLIAFGEWCAAQHSLDYDALPDWWLLFDVYDRERGCFWSTARRDAWAEQAGVATVKRVARGRFSQPALKALLQDARSSYRGGPMEGIVVRAETEEILVARAKLVRADFAQSIEEHWRSRPLHWNRLGD*