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scnpilot_p_inoc_scaffold_548_21

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 24590..25882

Top 3 Functional Annotations

Value Algorithm Source
Type IV / VI secretion system protein, DotU family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q331_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 413.0
  • Bit_score: 442
  • Evalue 4.20e-121
  • rbh
DotU family type IV / VI secretion system protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 413.0
  • Bit_score: 442
  • Evalue 1.20e-121
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:ADX45433.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 413.0
  • Bit_score: 442
  • Evalue 5.80e-121

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGTCCAACCCTTCGTTCAACGCCGGCAACAATCGCACCTTCGTGATGCCGAGCCCGGGCGGCGCCGCAGCGCCGCTGTCGGCGGCCGCGCAGCCCGTCTGGCAGTCGCACGAGCCGGAGATTCCGTCCGGCAACTCGCCGCTGATCGCACTGGCCAATCCGATCCTCAACCTCGTCTACCAGATCCGCACCCTCGTGCATAACGCGGATCCGGAACGGCTGAAGAACTATCTGGCCGACGAGATCCGCCGCTTCGACGCGAACGCGAAGGCACAGGGCATACCGGCCGAGCACATCGTCGCGGCGCGCTACTGCCTGTGCACCGTGCTCGACGAAGCCGCGGCGCAGACGCCCTGGGGCGGCTCGGGTGCCTGGTCGAAGAACTCGCTGCTGGTCACGTTCCACAACGAGACCTGGGGCGGCGAGAAGTTCTTCCAGCTGCTGGCCAAGCTCGCGCAGACGCCGGCGCAGTACATAGACGTTTTAGAGTTGATGTACTACTGCATCGCGCTCGGTTTCGAGGGCCGCTACCGCATCGTCTCCAACGGCCAGAGCCAGCTCGAGAACCTCAAGCGCCGCCTCGCCGACATCATCAAGACCGCGCGCGGCGTGCCGGATCGCGCGCTGTCGCTGCACTGGCAGGGACACGCGGCCGAGCTGCCGAAGATCTGGGGCATGATTCCGGTCTGGGTCTCGGCCGTCGTCGCCGTCGTGCTCGGCGTGGGCTTCTACATGCTGCTCGCGTTCTGGCTCGCGGCGCACTCGGACAAGAGCTTCATCGCGATCAGCGCGCTGAAGCTGCCGACACCGCCGCCGGTCGTGCGCGACGCGCCGCCGCCGCTGCGCTTTTCCAAGTTCCTCGAAAAGGAAATCCGCGAAGGCCTGGTCTCGGTCAAGGAGAATTCCGAGCAGAGCACCGTGACGATACGCGGCGACGGCCTGTTCGAATCCGGCAGCGCGACGATGCGACCGCAGTACCGCGACATCGTCGACCGCATCGCCGCAGCCGTCGCCGAGGTGAAGGGCCGCGTGCTCGTCAGCGGCCATACCGACGACCGGCCGATGCGCAGCGTGCGCTTCCCGTCGAACTGGGAGCTGTCGCAGGAGCGCGCGCGCGCGATCGCCGCGCAGCTCGACGCGACCGTGCGCTCGCCGGGACGCATCACCACCGAGGGCCGCGGCGAAGCCGACCCCATCGCCGACAACACGACGCCGGCCGGCCGCGCACAGAACCGCCGTGTCGAGATCACGGTGTTCGCCTCGCCGGTCGAGCTGAGCAAGGAGATCCGCTAG
PROTEIN sequence
Length: 431
MSNPSFNAGNNRTFVMPSPGGAAAPLSAAAQPVWQSHEPEIPSGNSPLIALANPILNLVYQIRTLVHNADPERLKNYLADEIRRFDANAKAQGIPAEHIVAARYCLCTVLDEAAAQTPWGGSGAWSKNSLLVTFHNETWGGEKFFQLLAKLAQTPAQYIDVLELMYYCIALGFEGRYRIVSNGQSQLENLKRRLADIIKTARGVPDRALSLHWQGHAAELPKIWGMIPVWVSAVVAVVLGVGFYMLLAFWLAAHSDKSFIAISALKLPTPPPVVRDAPPPLRFSKFLEKEIREGLVSVKENSEQSTVTIRGDGLFESGSATMRPQYRDIVDRIAAAVAEVKGRVLVSGHTDDRPMRSVRFPSNWELSQERARAIAAQLDATVRSPGRITTEGRGEADPIADNTTPAGRAQNRRVEITVFASPVELSKEIR*