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scnpilot_p_inoc_scaffold_548_20

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 23013..24347

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0114 family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q330_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 440.0
  • Bit_score: 492
  • Evalue 3.60e-136
  • rbh
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 440.0
  • Bit_score: 492
  • Evalue 1.00e-136
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:ADX45432.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 440.0
  • Bit_score: 492
  • Evalue 5.10e-136

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGGATCCGTACAAGAAAGTCGTCTGGGCCGAAGGCATGTTCCTGCGCCCGCAGCATTTCCAGCAGCAGGAACGCTATCTCGAATTCCACGCGCACCAGCGCAGCCTCGCCGCCGAGCCATTCTTCTGGGGCTTCCGCGAACTGCGCCTGGACGTGGCCGCGCTCGCAGTCGGCAAGCTCGCGATCCAGAACGCCATAGGCCTGCTGCCCGACGGCACCTCGTTCGCGTTCCCGACGCAGAGCGCCGCGCCCGAGCCGCTGCATTTCGGCGAAGGCGTGGTCAACCAGACCGTCTATCTCGCGCTGCCGCTGAAGCGGCCGGGTACCGAGCACGTCGTGTTCGAGGATCACCCGGCCTCGCTCGCGCGCTATACGGTCAGCGACGCCGTCGTGCGCGACGAGAACTCCATCGCCGGGGAGCCGGCCGATCTGCAGCTCGGCACGCCGCGCCTGCGCCTGGTGCTGGAGAAGGACCTGGCCGACGGCTGGCTCGGCATCGGCGTCGCGCGCGTGGTCGAATGCCGCAGCGACCGCCAGCTGCTGCTCGACAGCGAATACATACCGCCGGTGGTCTGCTGCTCGGCCTTCGCCTATCTGCTGTCGCTGCTCAACGAACTGCACGGTCTCGTGAACCAGCGCGCCGACGTGCTGGCCGACCGCCTGAGCCAGCCGGGCCGCGGCGGCGTATCGGAAGTCGGCGAGTTCCTGCTGCTGCAGATGCTCAACCGCTACCAGCCGCTGCTCGCGCACCTGATCAATCCGTCGGTACTGCATCCGGAGCGCTTCTACGCCGCGCTCGTGCAGATCGCCGGCGAGCTCGCGACGTTCATGGAAGCGTCACGCCGGCCGACGAGCTGGCCGCATTACGATCACGACGATCTGTACGGCTGCATCATGCCGCTGATGTTCCTGCTGCGCCGGGGCCTGTCGAGCGTGCTGGAACAGAACGCCGTGCAGATCGACCTGCAGATCCGCAACTACGGCGTGCGCGTCGGCCACGTCAACGACACGGAGCTGCTGCGAAGCGCCCAGTTCATCCTCGCCGTGCATGCGAGCACGCCGCCGGAAACCCTGCGCACGCATTTCCCGACCCAGGTCAAGATCGGCCCGGCCGACAAGATCCGCGATCTGGTGAACCTGCATCTGCCCGGCGTCGGCCTGCGCCTGCTGCCGGTCGCGCCGCGCCAGATCCCGTATCACGCGGGCTATCACTATTTCGAAATGGATACCTCGGTCGAACTGTGGAAGCAGCTGCAGAACACCGGCACGCTGGCCCTGCACGTCGCCGGCGAATTCCCCGACCTGGAACTCGAATGCTGGGCCGTGCGCCGCTGA
PROTEIN sequence
Length: 445
MDPYKKVVWAEGMFLRPQHFQQQERYLEFHAHQRSLAAEPFFWGFRELRLDVAALAVGKLAIQNAIGLLPDGTSFAFPTQSAAPEPLHFGEGVVNQTVYLALPLKRPGTEHVVFEDHPASLARYTVSDAVVRDENSIAGEPADLQLGTPRLRLVLEKDLADGWLGIGVARVVECRSDRQLLLDSEYIPPVVCCSAFAYLLSLLNELHGLVNQRADVLADRLSQPGRGGVSEVGEFLLLQMLNRYQPLLAHLINPSVLHPERFYAALVQIAGELATFMEASRRPTSWPHYDHDDLYGCIMPLMFLLRRGLSSVLEQNAVQIDLQIRNYGVRVGHVNDTELLRSAQFILAVHASTPPETLRTHFPTQVKIGPADKIRDLVNLHLPGVGLRLLPVAPRQIPYHAGYHYFEMDTSVELWKQLQNTGTLALHVAGEFPDLELECWAVRR*