ggKbase home page

scnpilot_p_inoc_scaffold_567_3

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 1564..5163

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion target GGXGXDXXX repeat protein domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VP21_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 775.0
  • Bit_score: 441
  • Evalue 2.60e-120
Type I secretion target GGXGXDXXX repeat protein domain protein {ECO:0000313|EMBL:EDX76511.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 775.0
  • Bit_score: 441
  • Evalue 3.60e-120
Ca2+-binding protein, RTX toxin similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 774.0
  • Bit_score: 423
  • Evalue 1.60e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coleofasciculus chthonoplastes → Coleofasciculus → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 3600
ATGTCCAGCACCATCCATTCCCCTGTACCCCAGGCCGTGGGCCGGCCGTCGTCCGGCGGCCGTCTGCGTCGTGGCCTGCTCGCGGCCGCGGTCTTCACCGCGACCCTGACCTGCGGCGCCGGCGTGCACGGCGCCGTGTCGTCCGTCTATCCGGCGGCGTCTTCCGCGCAGCCGGCAGTTGCGACCGCCGTGGCCGCGAAGCCGTCGGCCAAGCCGGCGGCACCGGCGCCGAAGTCCACCGACGTCAGCGTCGCCGTGAACGGCGCGGGTGCGGTCTACGTCAATCGCGCCGGCACCAGCCTGCAGTTCTGGGTCGCCAATACCGCCGACAATACGATCGTGCGCAAGGCGTCCGTTACGGTCGATCCGACCGTCGCGAACACCGTGTTCGTCGAGCTCGGCGACAATGTGACCGGCCTGTTCTATGCGGACAACCTCCGCGCGACCGGCGACCAGTTCCGCATCTCCTTCCGCGGCCAGCTGCCGCAGGGCGGCGCGGCGATGCCGCTCGCGGCGCAGGCGCTCGCGGCGCTGCAGGATGTCAGCGTGCCCGACGACGTCGTCACGGTCTCGCCGGTGCAGGTCGATCTGATGACCTTGCTCGACAACCAGCGCGCGATCTACCAGCGCGTGCAGGAAATCGCGCCGCTGCAGGCCGACCAGGTCGAGCTGTTCCGCCTGCTCGCCGAGCAGGAACTGGCCGACGCCTACACCACGCAGATCCATGAAGGCGCGACCGGCACCGCGTTCCTCAACCAGGCCGAGACGACCGTGCAGACGCTGCACGACCAGTTCATCGCGCGCGTCACGAACGACGTGGCGACCGCGCAGGCGGCCGCCGACGAGATCCTCGCGAAAGGCAACGAGCAGATCAAACGCTTCGCCGGTCCGGTGACCGAGTGCATCAACGGCCAGCTCACCCGCATCAGCAGCCGACTCAAGAGTCTCGAAGCGCGCCTGACCAACTGGCCCGACGACGAGTCCTACAACGCTCAGATCGAAGCCGAGATCGACGCGACCGAAAGCGCGCTCGAAACCAACGAGGCGATGCTGATGAGCTGCGTCGACACGCAGGGCCTCGAAGACTACGCGCCGACGGTCGGCGTCGACGAGAACGGTGCCAGCTACGAAGCCATCGCCAACGCCGCACAGGCGCTGGTCGACGATCTCGAACCGCGCGTGGAGGCCTGGCGCCTCGCGCTCGAAGCCGCCGGCGCGGCCAAGGCTTCGCGCATCGAGGACAGCGCGCTCGCGGCGAACACCTTGGCGGCGCAGGACTATTTCAGCGCCTGGGTCAGCCCGGTCTATTCCGACGAAAGCGATCCGCCGGTCGTGCCGGTGCTGCCCGGCTCGCGCAACAAGCAGGCCGACGCCGGCACGCCGGAAGCCGAAGCCGCCGCGAAAGCCAAGGCCGAAGCCAAGGCCCTCGCGCAGGCCAAGGGCATGGAAGTGCTCTGCGACGACGAGACCTGGAATCTCGAGTTCGCGCTCGGCTCGCTCAACGTCGTCATCGGCACGCCGTGGAACGACCGCATCGTGACCGGCGACGACAATGACGTGGTCGTCTCCTTCAGCGGTGACGACTGCATCGAAAGCCATGCCGGCTACGACTTCGTACTGGCCGGCCGCGGCAACGACACCGTGTACGCGGGCGAAGACCACGACTTCGTGCTCGGCGGCCGCGGCGACGACGAGATCCACGGCGGCTCCGGCCACACCTACACGATCACCATCGACGGCGTGGAGGTCGAGTTCGACCTCGGCAACCTGCTGATCGGCCAGTCCGGCGATGACCGCCTCTTCGGCGGCGAAGTCGACGCCGACCGCGGCGCCGACGGCGCCGTCGACGACCACGGCTATATGGACTTCATCTTCGGCGACGCGCTGCTGTTCGGCCAGCCGGCCGGCAACGACTTCATCGACGGCGAGATGGGCATCGACTTCCTGTTCGGCAACGACGGCAACGACCAGATCGTCAACATCGAGCCGGGTGTCATCGGCATCGCGGGCCTCGACGTGTCGTTCGGCAGCTGGTTCTTCGGCGGCCCCGGCAACGACGTGATCGTCGGCAGCAACACCGACGTCGCCGGCACCTTGCCGCTGCTCGGCGATTTCATCTTCGGCAACGCCGGCGACGACGTCATCGCCGCCAACCGCGGCATGGACTTCGTGTTCGGCGCCGACGGCAACGACCGCATCGACGGCGGTGCCGGCATGGACTTCGCGTTCGGCTCCGGCGGCAACGACTCCGTCGTCGGCGGCGACGGCTTCGATCTCGTGACCGGCAACGACGGCAACGACACGGTACGCGGCTCGGCCGGCTTCGACCTGGTGTTCGGCGGCGACGGCGACGATGCGCTGTTCGGCGACGACGGCATGGACCTGGTGTTCGGCCGTAGCGGCGCCGATACGATCTCCGGCGGCAACGGCATCGACCTGCTGCTCGGCGGCAGCGACAACGACGTCATCGACGGCAATGACGCCACCGACCTCGCCTTCGGCGGCGACGGCGAAGACCGCATCAACGGCAACGACGGCATCGACCTGCTGATGGGCCAGGCCCAGTCCGACACGATCCGCGGCGGCAGCGCCACCGACGTGATCCTCGGCGGCGGCAACACCGAGAAGAAGGACGAGTTCCTCTACGGCGAAGCCGGCTTCGACCTGGTGTTCGGTAACGCCGGCAACGACGTGATCGAAGGCGGCGCCGATCTCGACCTGCTGTTCGGCAACCGCGGCGACGACCGCATCGACGGCAACGACGGTACCGACCTGGTGTTCGGCGGCGACGGCTACGACGTCGTCAACGGCAACGCCGGTCTCGACATCCTGTTCGGCGGCGGCGGCCGTGACACCATCGACGGCGGTGCGGACACCGACGTGATCTTCGGCGGCAGCGACTGCGACACGATCGCCGGCGGCGACGCCCCCGACCTGATCTTCGGCAACGACGGCAAGGACAAGATCGACGGCGGCGACAGCCTCGACATCGTGTTCGGCGGCAAGAGCCAGGATCACATCCTGGGCAGCGGCAGCCCCGACTTCCTGTTCGGCGGCGACGATCACGACTACATCGACGGCGGTGATGCGTTCGACGTGATCCTGGGCCAGTCCGGCGACGACTACCTCGTCGGCGGCGACAGTCTCGACGTGCTCCTGGGCAACGGCGGCAACGACTACCTCGGTGGCGGTGTGGGTGCCGACTTCGCGTTCGGCGGCGCCGACAACGACGTGCTCGACGGCGGCGACGGCAGCGACCTGCTGTTCGGCGGCGCCGGCGACGACAAGATCAATTCCGGCAGCGGCACGGACTTCAGCTTCGGCAACGCCGGCAACGATCATCTGCGCGCGGTCGAAGGCACGAACTTCGCGTTCGGCAACAAGGGCGACGATCGTGTCGACGGCTACCAGGGCTCGGGCAGCGACAACCGCGACTTCCTGTTCGGCAACAGCGACAACGACATGATCACGGGCAACCAGTCCAGCCAGAAGGATCTGCGCATGGGCGGCAGCGGCAGCGACACCAAGGTCTGGAACCAGACCTACGTGCCGGCCAGTGCGTTCAGCGTGTCCTGGATCGGCAATCTGACCTGTCAGTAA
PROTEIN sequence
Length: 1200
MSSTIHSPVPQAVGRPSSGGRLRRGLLAAAVFTATLTCGAGVHGAVSSVYPAASSAQPAVATAVAAKPSAKPAAPAPKSTDVSVAVNGAGAVYVNRAGTSLQFWVANTADNTIVRKASVTVDPTVANTVFVELGDNVTGLFYADNLRATGDQFRISFRGQLPQGGAAMPLAAQALAALQDVSVPDDVVTVSPVQVDLMTLLDNQRAIYQRVQEIAPLQADQVELFRLLAEQELADAYTTQIHEGATGTAFLNQAETTVQTLHDQFIARVTNDVATAQAAADEILAKGNEQIKRFAGPVTECINGQLTRISSRLKSLEARLTNWPDDESYNAQIEAEIDATESALETNEAMLMSCVDTQGLEDYAPTVGVDENGASYEAIANAAQALVDDLEPRVEAWRLALEAAGAAKASRIEDSALAANTLAAQDYFSAWVSPVYSDESDPPVVPVLPGSRNKQADAGTPEAEAAAKAKAEAKALAQAKGMEVLCDDETWNLEFALGSLNVVIGTPWNDRIVTGDDNDVVVSFSGDDCIESHAGYDFVLAGRGNDTVYAGEDHDFVLGGRGDDEIHGGSGHTYTITIDGVEVEFDLGNLLIGQSGDDRLFGGEVDADRGADGAVDDHGYMDFIFGDALLFGQPAGNDFIDGEMGIDFLFGNDGNDQIVNIEPGVIGIAGLDVSFGSWFFGGPGNDVIVGSNTDVAGTLPLLGDFIFGNAGDDVIAANRGMDFVFGADGNDRIDGGAGMDFAFGSGGNDSVVGGDGFDLVTGNDGNDTVRGSAGFDLVFGGDGDDALFGDDGMDLVFGRSGADTISGGNGIDLLLGGSDNDVIDGNDATDLAFGGDGEDRINGNDGIDLLMGQAQSDTIRGGSATDVILGGGNTEKKDEFLYGEAGFDLVFGNAGNDVIEGGADLDLLFGNRGDDRIDGNDGTDLVFGGDGYDVVNGNAGLDILFGGGGRDTIDGGADTDVIFGGSDCDTIAGGDAPDLIFGNDGKDKIDGGDSLDIVFGGKSQDHILGSGSPDFLFGGDDHDYIDGGDAFDVILGQSGDDYLVGGDSLDVLLGNGGNDYLGGGVGADFAFGGADNDVLDGGDGSDLLFGGAGDDKINSGSGTDFSFGNAGNDHLRAVEGTNFAFGNKGDDRVDGYQGSGSDNRDFLFGNSDNDMITGNQSSQKDLRMGGSGSDTKVWNQTYVPASAFSVSWIGNLTCQ*