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scnpilot_p_inoc_scaffold_567

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_567_1
unknown

Not on your lists

581..859
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_567_2
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(975..1181)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Shewanella baltica OS625 RepID=G6E553_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79711.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithinc
scnpilot_p_inoc_scaffold_567_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1564..5163
DNA (3600bp) protein (1200aa)
Type I secretion target GGXGXDXXX repeat protein domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VP21_9CYAN
Type I secretion target GGXGXDXXX repeat protein domain protein {ECO:0000313|EMBL:EDX76511.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;"
Ca2+-binding protein, RTX toxin
scnpilot_p_inoc_scaffold_567_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5367..6749)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000378D8E0 rbh
cytochrome C oxidase subunit II
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:AHX14787.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangni
scnpilot_p_inoc_scaffold_567_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6820..7512)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DC486
HAD family hydrolase {ECO:0000313|EMBL:GAN45209.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter
haloacid dehalogenase
scnpilot_p_inoc_scaffold_567_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7514..8737)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003748014 rbh
Peptidoglycan-binding protein {ECO:0000313|EMBL:GAN45210.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
ABC-type phosphate transport system, periplasmic component
scnpilot_p_inoc_scaffold_567_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8936..10327)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DC7AE rbh
Heat-shock protein {ECO:0000313|EMBL:GAN45211.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
heat-shock protein
scnpilot_p_inoc_scaffold_567_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10733..12880
DNA (2148bp) protein (716aa)
ribonucleotide reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI000373C83B rbh
NrdJa {ECO:0000313|EMBL:GAN45212.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
NrdJa
scnpilot_p_inoc_scaffold_567_9
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12962..13510
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GIL2_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KFN45488.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
histone H1-like nucleoHC2 family protein
scnpilot_p_inoc_scaffold_567_10
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13928..14710
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365BD5E rbh
NrdJb {ECO:0000313|EMBL:KFL37142.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = H
NrdJb
scnpilot_p_inoc_scaffold_567_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15108..15629
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBA0
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_567_12
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

15631..15852
DNA (222bp) protein (74aa)
Putative transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J3A2Z6_9SPHN
helix-turn-helix domain protein
Tax=BJP_IG2102_Coriobacteriales_64_17
scnpilot_p_inoc_scaffold_567_13
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

15856..16305
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZTJ4_9BACT
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
scnpilot_p_inoc_scaffold_567_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16363..16788)
DNA (426bp) protein (142aa)
Putative CBS domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG1C9 RepID=B3T6D9_9ZZZZ
CBS domain protein {ECO:0000313|EMBL:KGQ20444.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis
hypothetical protein
scnpilot_p_inoc_scaffold_567_15
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17140..18135
DNA (996bp) protein (332aa)
serine protease n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036749C3 rbh
putative serine protease
Putative serine protease {ECO:0000313|EMBL:BAO88505.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
scnpilot_p_inoc_scaffold_567_16
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18211..19728)
DNA (1518bp) protein (506aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7K0_9RHIZ rbh
Ferredoxin reductase {ECO:0000313|EMBL:KGQ18341.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensi
pyridine nucleotide-disulfide oxidoreductase family protein
scnpilot_p_inoc_scaffold_567_17
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19889..20518
DNA (630bp) protein (210aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter denitrificans RepID=I4WUV0_9GAMM
GTP cyclohydrolase I
scnpilot_p_inoc_scaffold_567_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20570..21274
DNA (705bp) protein (235aa)
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter d
RNA polymerase sigma factor, sigma-70 family
scnpilot_p_inoc_scaffold_567_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21315..21659
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6X7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95218.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_567_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21656..22069
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6X8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95219.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_567_21
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22086..23033)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373FD5D rbh
dyp-type peroxidase family protein
Dyp-type peroxidase family {ECO:0000313|EMBL:AEU36670.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATC
scnpilot_p_inoc_scaffold_567_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23106..24317)
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HE2_MESSB rbh
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABG63183.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativoran
scnpilot_p_inoc_scaffold_567_23
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24677..25561)
DNA (885bp) protein (295aa)
methyltransferase type 11 n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289864F
SmtA protein {ECO:0000313|EMBL:BAQ46152.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
methyltransferase
scnpilot_p_inoc_scaffold_567_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25997..27127
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037E9E24 rbh
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20569.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_p_inoc_scaffold_567_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27120..28154
DNA (1035bp) protein (345aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAB4_VARPE rbh
DNA methylase n-4/n-6 domain-containing protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ADU38586.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
scnpilot_p_inoc_scaffold_567_26
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28176..28856)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1Q550_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EJI86273.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella a
hypothetical protein
scnpilot_p_inoc_scaffold_567_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28906..29583
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLX3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR67831.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_p_inoc_scaffold_567_28
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29773..30642)
DNA (870bp) protein (290aa)
Putative zinc metallopeptidase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HYC4_PSEUO rbh
Metallopeptidase {ECO:0000313|EMBL:ETM65629.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1
metallopeptidase
scnpilot_p_inoc_scaffold_567_29
unknown

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comp(30759..30974)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_567_30
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31049..31828
DNA (780bp) protein (260aa)
Tropinone reductase {ECO:0000313|EMBL:GAN45503.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter s
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Putative short-chain dehydrogenase/reductase protein id=2588160 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
Displaying items 1-30 of 56 in total

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