ggKbase home page

scnpilot_p_inoc_scaffold_567_18

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 20570..21274

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 228.0
  • Bit_score: 267
  • Evalue 1.70e-68
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter d similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 228.0
  • Bit_score: 286
  • Evalue 2.90e-74
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 230.0
  • Bit_score: 258
  • Evalue 2.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACCGCAAGCGCTACCTCGCGCACCGTCGACTACGCTGCGCTGGACGATCCCGCGCTGACCCTGCTGCTGCAGCGCGGCGACCGCACCGCGTTCCGCGAACTCATGCAGCGCAGCAACCGGCGCCTGTTCCGCGTCGCGCGCGGCGTGCTCGGCAGCGACGGCGAAGCCGAGGACGTGGTGCAGGAGGCCTATATGGAGGCCTATGCGAACCTCGCGACGTTCCGCGGCGAAGCCTCGCTGCTGACCTGGCTCACGCGCATCGTGCTGAACGCGTCCTACGGCCGCCTGCGCTGCCGGCGCAGCCTCGTGGAGGTCGAACAGATCGAAGCCGCGCAGCTCGATCCGGGGCGCATCGTCGCGTTTCCGGGCGCCGCCGCCGATCCGGCCGCCGCGGTCGCGCGGGAACAGATCCGCCGCCTGATCGAGAAAGCCGTCGACGCGCTGCCCGAACCGTTCCGCGTCGTGTTCGTACTGCGCGAGATCGAGGGCTGTACGGTCGAGGAAACCGCGACCGCGCTGAGCCTGCGCGCCGAAACCGTCAAGACGCGGCTGCACCGCGCGCGCCGGCAACTGCACGCGGCGCTCAGCGACACGCTGGCGACGACTCTGAATGACGCATTTCCGTTTCTGGGCGCGCGCTGCGAGCGCATGACCGAGGCGGTGATGCAGCGCCTTGCCTCGCTGCCGCCCGGTAGCGACTGA
PROTEIN sequence
Length: 235
MTASATSRTVDYAALDDPALTLLLQRGDRTAFRELMQRSNRRLFRVARGVLGSDGEAEDVVQEAYMEAYANLATFRGEASLLTWLTRIVLNASYGRLRCRRSLVEVEQIEAAQLDPGRIVAFPGAAADPAAAVAREQIRRLIEKAVDALPEPFRVVFVLREIEGCTVEETATALSLRAETVKTRLHRARRQLHAALSDTLATTLNDAFPFLGARCERMTEAVMQRLASLPPGSD*