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scnpilot_p_inoc_scaffold_1103

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1103_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..682)
DNA (681bp) protein (227aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1451261 species="Bacteria; A
DNA gyrase subunit B n=2 Tax=Microbacterium RepID=H8E9B9_9MICO
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
scnpilot_p_inoc_scaffold_1103_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(806..1291)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9B8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EIC06512.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
scnpilot_p_inoc_scaffold_1103_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1284..2492)
DNA (1209bp) protein (403aa)
DNA replication and repair protein RecF n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9B7_9MICO rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter
recF; recombinational DNA repair ATPase
scnpilot_p_inoc_scaffold_1103_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2554..3696)
DNA (1143bp) protein (381aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1203549 species="Bacte
DNA polymerase III subunit beta n=2 Tax=Microbacterium RepID=H8E9B6_9MICO rbh
dnaN; DNA polymerase sliding clamp subunit
scnpilot_p_inoc_scaffold_1103_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4163..5581)
DNA (1419bp) protein (473aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Microbacterium RepID=H8E9B5_9MICO rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
dnaA; ATPase
scnpilot_p_inoc_scaffold_1103_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5909..6046
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=2 Tax=Microbacterium RepID=H8E9B4_9MICO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rpmH; ribosomal protein L34
scnpilot_p_inoc_scaffold_1103_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6057..6395
DNA (339bp) protein (113aa)
Ribonuclease P protein component n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9B3_9MICO
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
RNase P protein component
scnpilot_p_inoc_scaffold_1103_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6368..6778
DNA (411bp) protein (137aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Microbacterium RepID=H8E9B2_9MICO
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriacea
hypothetical protein
scnpilot_p_inoc_scaffold_1103_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6782..7909
DNA (1128bp) protein (376aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Microbacterium RepID=H8E9B1_9MICO rbh
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EIC06505.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
preprotein translocase subunit YidC
scnpilot_p_inoc_scaffold_1103_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7938..8444
DNA (507bp) protein (169aa)
Single-stranded nucleic acid binding R3H domain-containing protein n=2 Tax=Microbacterium RepID=H8E9B0_9MICO rbh
DNA-binding protein {ECO:0000313|EMBL:EXJ51400.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
RNA-binding protein
scnpilot_p_inoc_scaffold_1103_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8450..9103
DNA (654bp) protein (218aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Microbacterium RepID=H8E9A9_9MICO rbh
gidB; S-adenosylmethionine-dependent methyltransferase
scnpilot_p_inoc_scaffold_1103_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10108..11043
DNA (936bp) protein (312aa)
Chromosome partitioning protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGG7_9MICO rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EPD85860.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxo
parA; ATPase
scnpilot_p_inoc_scaffold_1103_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11043..12074
DNA (1032bp) protein (344aa)
ParB family chromosome partitioning protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABT9_9MICO rbh
Chromosome partitioning protein ParB {ECO:0000313|EMBL:EXJ51403.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-
parB; transcriptional regulator
scnpilot_p_inoc_scaffold_1103_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12084..12425
DNA (342bp) protein (114aa)
Tryptophan synthase alpha chain n=2 Tax=Microbacterium RepID=H8E9A6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51404.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
tryptophan synthase alpha chain
scnpilot_p_inoc_scaffold_1103_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12484..12807)
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Microbacterium RepID=H8E9A5_9MICO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;
trxA; thiol-disulfide isomerase and thioredoxins
scnpilot_p_inoc_scaffold_1103_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12906..13940)
DNA (1035bp) protein (345aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
Thioredoxin reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A4_9MICO rbh
trxB; thioredoxin reductase
scnpilot_p_inoc_scaffold_1103_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13970..15580)
DNA (1611bp) protein (537aa)
Integral membrane protein MviN n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A3_9MICO rbh
Integral membrane protein MviN {ECO:0000313|EMBL:KIC57956.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein, virulence factor
scnpilot_p_inoc_scaffold_1103_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15573..17693)
DNA (2121bp) protein (707aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXJ51435.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
scnpilot_p_inoc_scaffold_1103_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17955..19502
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUS9_9MICO rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:EXJ51408.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
methylase of polypeptide chain release factors
scnpilot_p_inoc_scaffold_1103_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19542..20981
DNA (1440bp) protein (480aa)
CCA tRNA nucleotidyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9M5_9MICO rbh
RNA nucleotidyltransferase {ECO:0000313|EMBL:EXJ51409.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase
scnpilot_p_inoc_scaffold_1103_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21120..22448
DNA (1329bp) protein (443aa)
GAF domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E999_9MICO rbh
Transcriptional regulator {ECO:0000313|EMBL:EXJ51410.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional activator of acetoin/glycerol metabolism
scnpilot_p_inoc_scaffold_1103_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22600..24738
DNA (2139bp) protein (713aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E998_9MICO rbh
scnpilot_p_inoc_scaffold_1103_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24710..25063)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E997_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06491.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
PecM protein
scnpilot_p_inoc_scaffold_1103_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25083..25292
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUT3_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC06490.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_1103_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25530..27077
DNA (1548bp) protein (516aa)
Aldehyde Dehydrogenase n=2 Tax=Microbacterium RepID=H8E995_9MICO rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EXJ51413.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_1103_26
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27170..27553
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E994_9MICO
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KIC57948.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1103_27
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27691..27813)
DNA (123bp) protein (41aa)
Transposase and inactivated derivatives n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBE2_MICTS
Transposase {ECO:0000313|EMBL:KIC55870.1}; Flags: Fragment;; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transposase and inactivated derivatives
Displaying 27 items

View Taxonomy