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scnpilot_p_inoc_scaffold_1132_4

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1160..1783

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Microbacterium RepID=H8E6W8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 207.0
  • Bit_score: 360
  • Evalue 1.00e-96
  • rbh
LysR substrate-binding protein {ECO:0000313|EMBL:EIC07404.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 207.0
  • Bit_score: 361
  • Evalue 6.30e-97
Hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 210.0
  • Bit_score: 171
  • Evalue 2.40e-40

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGCAGTCGACGGTGTCGGCCGGCATCCAGACTCTCGAGCAGCGCATGGGAACCCGGCTTATCGAACGCTCCGGCCGCCGCGTCGCGCTCACCGCCGCCGGCGAGCAGCTGCTGGAGCCCGCTCGGGAGATCGTCGACGCGACGAGCCGATTGCAGAGCGCGGCGACCGGTCGCGTCGAGGGGCTGCTGCGGGTCGGCATCTTCGTCAACCTCCCGACGCTGCGCATGCCGGAGCTGTTCGCCGCCTTCCGCGCCGAGCACCCGCTCGTCCGCCTGCGCCTGATCTCCTCTCCCTCCGGCTCCACCGGCCTCGCCGACGAGCTGCGGCGGGGACGGATCGACCTCGCCTTCATGGGGCTGCCGTCCGCGGAGCTGCCCGACCTCGAGACCGTCGAGCTGGTGCGCTCCGCCTTCGTCGCACTGCTGCCAGACGACCATCCGCTCAGCGGGTCGCCGGAGATCACCCTCGAGAGCCTGGCGCCGCAGCCGTGGATCGACGCGCCGCACGGCTTCGGCCATCGCGTCCTCATCGAGCGCGCGCTCGCCCGCGCCGGGCTGGTGCGCGAGGTGGCGACCGAGGTCTCCGCCGTCGGCGACATCCCCGCGTTCGTCGCGGCCGGATGA
PROTEIN sequence
Length: 208
VQSTVSAGIQTLEQRMGTRLIERSGRRVALTAAGEQLLEPAREIVDATSRLQSAATGRVEGLLRVGIFVNLPTLRMPELFAAFRAEHPLVRLRLISSPSGSTGLADELRRGRIDLAFMGLPSAELPDLETVELVRSAFVALLPDDHPLSGSPEITLESLAPQPWIDAPHGFGHRVLIERALARAGLVREVATEVSAVGDIPAFVAAG*