ggKbase home page

scnpilot_p_inoc_scaffold_1132

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1132_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(30..200)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=3 Tax=Microbacterium RepID=H8E6X1_9MICO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon
rpmG; ribosomal protein L33
scnpilot_p_inoc_scaffold_1132_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(200..436)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=3 Tax=Microbacterium RepID=H8E6X0_9MICO
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rpmB; ribosomal protein L28
scnpilot_p_inoc_scaffold_1132_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(648..1097)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7B0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51773.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
putative MFS transporter
scnpilot_p_inoc_scaffold_1132_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1160..1783
DNA (624bp) protein (208aa)
LysR substrate-binding protein n=2 Tax=Microbacterium RepID=H8E6W8_9MICO rbh
LysR substrate-binding protein {ECO:0000313|EMBL:EIC07404.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans
Hypothetical protein
scnpilot_p_inoc_scaffold_1132_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1790..2461)
DNA (672bp) protein (224aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1451261 s
Putative 3-methyladenine DNA glycosylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B7A7_9MICO rbh
3-methyladenine DNA glycosylase
scnpilot_p_inoc_scaffold_1132_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2458..3882)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6W6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC58723.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3872..4603)
DNA (732bp) protein (244aa)
TIGR03943 family protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQN3_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXJ51768.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4596..5606)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7A3_9MICO rbh
Permease {ECO:0000313|EMBL:EXJ51767.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease
scnpilot_p_inoc_scaffold_1132_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5596..6018)
DNA (423bp) protein (141aa)
Ferric-uptake regulator n=2 Tax=Microbacterium RepID=H8E6W3_9MICO
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXJ51766.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacte
fur; Fe2+/Zn2+ uptake regulation proteins
scnpilot_p_inoc_scaffold_1132_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6075..6935)
DNA (861bp) protein (287aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6W2_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:KIC58720.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
znuB; Mn/Zn ABC transporter permease
scnpilot_p_inoc_scaffold_1132_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6932..7771)
DNA (840bp) protein (280aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6W1_9MICO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC58719.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
fhuC; Mn/Zn ABC transporter ATPase
scnpilot_p_inoc_scaffold_1132_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7768..8706)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQM8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXJ51763.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metal ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_1132_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9001..9492
DNA (492bp) protein (164aa)
Putative manganese efflux pump MntP n=2 Tax=Microbacterium RepID=H8E6V9_9MICO rbh
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
hypothetical protein
scnpilot_p_inoc_scaffold_1132_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9551..9784
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E6V8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51760.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1132_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9816..10442)
DNA (627bp) protein (209aa)
Multiple antibiotic resistance (MarC)-related protein n=2 Tax=Microbacterium RepID=H8E6V7_9MICO rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Multiple antibiotic transport protein marC
scnpilot_p_inoc_scaffold_1132_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10474..11799)
DNA (1326bp) protein (442aa)
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5T3_9MICO rbh
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EXJ51758.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micr
pdhC; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
scnpilot_p_inoc_scaffold_1132_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11922..12899)
DNA (978bp) protein (326aa)
Transketolase central region n=2 Tax=Microbacterium RepID=H8E6V5_9MICO rbh
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:EXJ51757.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium s
pdhB; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
scnpilot_p_inoc_scaffold_1132_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12899..14026)
DNA (1128bp) protein (376aa)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A793_9MICO rbh
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:EPD84461.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacte
pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
scnpilot_p_inoc_scaffold_1132_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14120..15190)
DNA (1071bp) protein (357aa)
Putative phenylalanine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01513}; EC=2.6.1.- {ECO:0000256|HAMAP-Rule:MF_01513};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriac
Putative phenylalanine aminotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6V3_9MICO rbh
hisC2; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
scnpilot_p_inoc_scaffold_1132_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15270..15671
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B794_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84459.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
hypothetical protein
scnpilot_p_inoc_scaffold_1132_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15688..17016)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5T0_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84458.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
hypothetical protein
scnpilot_p_inoc_scaffold_1132_22
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17013..17201)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQM2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84457.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
scnpilot_p_inoc_scaffold_1132_23
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17459..17896
DNA (438bp) protein (146aa)
Protein-tyrosine phosphatase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A790_9MICO
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EPD84456.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 1
ptpA; protein-tyrosine-phosphatase
scnpilot_p_inoc_scaffold_1132_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17907..19343
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACQ9_9MICO rbh
Adenylosuccinate lyase {ECO:0000313|EMBL:EPD84455.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str
purB; adenylosuccinate lyase
scnpilot_p_inoc_scaffold_1132_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19373..19708)
DNA (336bp) protein (112aa)
Amino acid transporter n=2 Tax=Microbacterium RepID=H8E6U7_9MICO
Amino acid transporter {ECO:0000313|EMBL:EIC07383.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;
amino acid transporters
scnpilot_p_inoc_scaffold_1132_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19705..20397)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5S6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84453.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
scnpilot_p_inoc_scaffold_1132_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20507..20944)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQL6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51318.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20957..21367)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) RepID=G0H9R0_CORVD
Glyoxalase {ECO:0000313|EMBL:KIC58706.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_29
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21373..21810)
DNA (438bp) protein (146aa)
AraC family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI00031123A1
AraC family transcriptional regulator {ECO:0000313|EMBL:KIC58705.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1132_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21807..22796)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A784_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84451.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
oxidoreductase
Displaying items 1-30 of 34 in total

View Taxonomy