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scnpilot_p_inoc_scaffold_4704

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4704_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1563
DNA (1563bp) protein (521aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome BD oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI00037E9DE1
cytochrome bd ubiquinol oxidase subunit I
scnpilot_p_inoc_scaffold_4704_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1573..2709
DNA (1137bp) protein (379aa)
cytochrome d ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] Tax=GWE1_Thiobacillus_62_9_curated
cytochrome BD oxidase subunit II n=1 Tax=Thiobacillus thioparus RepID=UPI00035FFB0A
cytochrome d ubiquinol oxidase, subunit II
scnpilot_p_inoc_scaffold_4704_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2721..2858
DNA (138bp) protein (46aa)
Cyd operon protein YbgT id=1359581 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Cyd operon protein YbgT Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_4704_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2855..4090
DNA (1236bp) protein (412aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=1359580 bin=GWE1_T_denit_62_9 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=GWE1_Thiobacillus_62_9_curated
Sulfide-quinone reductase
scnpilot_p_inoc_scaffold_4704_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4087..4374
DNA (288bp) protein (96aa)
Cyd operon protein YbgE id=1359579 bin=GWE1_T_denit_62_9 species=Thalassolituus oleivorans genus=Thalassolituus taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Cyd operon protein YbgE (Cyd_oper_YbgE) family protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4704_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4379..4762
DNA (384bp) protein (128aa)
Conserved hypothetical globin-like protein id=1359578 bin=GWE1_T_denit_62_9 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein; K06886 hemoglobin Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4704_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4818..5465
DNA (648bp) protein (216aa)
ahpC_[C]; Alkyl hydroperoxide reductase subunit C-like protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ahpC_[C]; Alkyl hydroperoxide reductase subunit C-like protein id=12496870 bin=THIO_MID species=Dyella ginsengisoli genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
peroxiredoxin
scnpilot_p_inoc_scaffold_4704_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5654..5869
DNA (216bp) protein (72aa)
Zinc/iron permease id=1359577 bin=GWE1_T_denit_62_9 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
zinc/iron permease Tax=GWE1_Thiobacillus_62_9_curated
zinc/iron permease
scnpilot_p_inoc_scaffold_4704_9
unknown

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comp(5821..5967)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_4704_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6342..6926
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D46EB
cytochrome c family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome c family protein
scnpilot_p_inoc_scaffold_4704_11
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7029..7364
DNA (336bp) protein (112aa)
Sulfidequinone reductase n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IN58_LEPFC
sulfidequinone reductase
Sulfidequinone reductase {ECO:0000313|EMBL:BAM06707.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C2-3)
scnpilot_p_inoc_scaffold_4704_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7369..7902)
DNA (534bp) protein (178aa)
diguanylate cyclase/phosphodiesterase id=12495183 bin=THIO_HI species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
diguanylate cyclase/phosphodiesterase
Displaying 12 items

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