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scnpilot_p_inoc_scaffold_3260

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3260_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..354
DNA (354bp) protein (118aa)
Transposase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT63_9BURK
Transposase {ECO:0000313|EMBL:EIK92403.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ISBmu8 transposase
scnpilot_p_inoc_scaffold_3260_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(471..944)
DNA (474bp) protein (158aa)
id=5081446 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5081446 Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_p_inoc_scaffold_3260_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1006..2970)
DNA (1965bp) protein (655aa)
hypothetical protein id=5081447 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_3260_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2979..3788)
DNA (810bp) protein (270aa)
Pnap3592-like protein id=1283686 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PL2G6 genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_3260_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3796..4266)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Uncharacterized protein id=1283685 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_3260_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4263..4919)
DNA (657bp) protein (219aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Uncharacterized protein id=1283684 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_3260_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..5685)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT57_9BURK
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3260_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6037..6582)
DNA (546bp) protein (182aa)
AsnC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT56_9BURK rbh
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIK92396.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr
asnC family transcriptional regulator
scnpilot_p_inoc_scaffold_3260_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6709..10176
DNA (3468bp) protein (1156aa)
Indolepyruvate ferredoxin oxidoreductase subunits alpha and beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT55_9BURK rbh
Indolepyruvate ferredoxin oxidoreductase subunits alpha and beta {ECO:0000313|EMBL:EIK92395.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hyd
indolepyruvate ferredoxin oxidoreductase subunits alpha and beta
Displaying 9 items

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