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scnpilot_p_inoc_scaffold_3955

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3955_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..578)
DNA (576bp) protein (192aa)
Protein translocase subunit SecA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRT0_9BURK
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
secA; protein translocase, subunit SecA
scnpilot_p_inoc_scaffold_3955_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(754..1707)
DNA (954bp) protein (318aa)
Peptidase M23 {ECO:0000313|EMBL:EIK91919.1}; EC=3.4.24.- {ECO:0000313|EMBL:EIK91919.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenop
Peptidase M23 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS9_9BURK rbh
peptidase M23B
scnpilot_p_inoc_scaffold_3955_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1772..2086
DNA (315bp) protein (105aa)
hypothetical protein id=5082072 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3955_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2204..2674)
DNA (471bp) protein (157aa)
Stringent starvation protein B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS8_9BURK
Stringent starvation protein B {ECO:0000313|EMBL:EIK91918.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
sspB; stringent starvation protein B SspB
scnpilot_p_inoc_scaffold_3955_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2700..3311)
DNA (612bp) protein (204aa)
Glutathione s-transferase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS7_9BURK rbh
Glutathione s-transferase domain-containing protein {ECO:0000313|EMBL:EIK91917.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;
glutathione S-transferase domain-containing protein
scnpilot_p_inoc_scaffold_3955_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3417..4172)
DNA (756bp) protein (252aa)
Cytochrome c1 {ECO:0000313|EMBL:EIK91916.1}; EC=1.10.2.2 {ECO:0000313|EMBL:EIK91916.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenop
Cytochrome c1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS6_9BURK rbh
cytochrome c1
scnpilot_p_inoc_scaffold_3955_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4205..5437)
DNA (1233bp) protein (411aa)
Cytochrome b n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS5_9BURK rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cytochrome b/b6 domain-containing protein
scnpilot_p_inoc_scaffold_3955_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6183)
DNA (618bp) protein (206aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS4_9BURK rbh
petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit
scnpilot_p_inoc_scaffold_3955_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6346..6777
DNA (432bp) protein (144aa)
Large-conductance mechanosensitive channel n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS3_9BURK
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
large conductance mechanosensitive channel protein
scnpilot_p_inoc_scaffold_3955_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6767..7813)
DNA (1047bp) protein (349aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS2_9BURK rbh
scnpilot_p_inoc_scaffold_3955_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7813..8568)
DNA (756bp) protein (252aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=795665 species="Bacteria
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS1_9BURK rbh
hypothetical protein
scnpilot_p_inoc_scaffold_3955_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8633..9817
DNA (1185bp) protein (395aa)
Putative serine protease do-like protein {ECO:0000313|EMBL:EIK91910.1}; EC=3.4.21.- {ECO:0000313|EMBL:EIK91910.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Putative serine protease do-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS0_9BURK rbh
peptidase S1 and S6, chymotrypsin/Hap
scnpilot_p_inoc_scaffold_3955_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9845..10642)
DNA (798bp) protein (266aa)
Sec-independent protein translocase protein TatC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR9_9BURK rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
Sec-independent protein translocase subunit TatC
scnpilot_p_inoc_scaffold_3955_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10642..11142)
DNA (501bp) protein (167aa)
Sec-independent protein translocase protein TatB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR8_9BURK
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
tatB; sec-independent translocase
scnpilot_p_inoc_scaffold_3955_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11222..11464)
DNA (243bp) protein (81aa)
Sec-independent protein translocase protein TatA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR7_9BURK
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
tatA; twin arginine translocase protein A
scnpilot_p_inoc_scaffold_3955_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11571..11933)
DNA (363bp) protein (121aa)
Histidine triad (HIT) protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR6_9BURK
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIK91906.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
diadenosine tetraphosphate Ap4A hydrolase and other HIT family hydrolase
scnpilot_p_inoc_scaffold_3955_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11946..12335)
DNA (390bp) protein (130aa)
Putative transmembrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR5_9BURK
Putative transmembrane protein {ECO:0000313|EMBL:EIK91905.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
transmembrane protein
scnpilot_p_inoc_scaffold_3955_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..12708)
DNA (369bp) protein (123aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR4_9BURK
phosphoribosyL-ATP diphosphatase
scnpilot_p_inoc_scaffold_3955_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12774..13163)
DNA (390bp) protein (130aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
phosphoribosyL-amp cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR3_9BURK
scnpilot_p_inoc_scaffold_3955_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13163..13924)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR2_9BURK rbh
imidazole glycerol phosphate synthase subunit HisF
scnpilot_p_inoc_scaffold_3955_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13931..14236)
DNA (306bp) protein (102aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR1_9BURK
Displaying 21 items

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