ggKbase home page

scnpilot_p_inoc_scaffold_1482

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1482_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..522
DNA (522bp) protein (174aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=795665 species="Bacteria; Proteobacteria; Beta
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ5_9BURK
scnpilot_p_inoc_scaffold_1482_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

534..1436
DNA (903bp) protein (301aa)
Peptidase C26 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ6_9BURK rbh
Peptidase C26 {ECO:0000313|EMBL:EIK90936.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
peptidase C26
scnpilot_p_inoc_scaffold_1482_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1464..1994
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK90937.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1482_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1957..3357)
DNA (1401bp) protein (467aa)
Carbohydrate kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ8_9BURK rbh
Carbohydrate kinase {ECO:0000313|EMBL:EIK90938.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC
carbohydrate kinase
scnpilot_p_inoc_scaffold_1482_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3378..4628)
DNA (1251bp) protein (417aa)
D-amino-acid dehydrogenase (EC:1.4.99.1)
D-amino-acid dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ9_9BURK rbh
D-amino-acid dehydrogenase {ECO:0000313|EMBL:EIK90939.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
scnpilot_p_inoc_scaffold_1482_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4835..5587
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP00_9BURK rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
rpsB; 30S ribosomal protein S2
scnpilot_p_inoc_scaffold_1482_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5695..6582
DNA (888bp) protein (296aa)
Elongation factor Ts n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP01_9BURK rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteri
tsf; elongation factor Ts rbh
scnpilot_p_inoc_scaffold_1482_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6728..7438
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP02_9BURK rbh
pyrH; uridylate kinase
scnpilot_p_inoc_scaffold_1482_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7467..8027
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP03_9BURK rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=795665 species="Bacteria;
frr; ribosome recycling factor
scnpilot_p_inoc_scaffold_1482_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8059..8808
DNA (750bp) protein (250aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
Isoprenyl transferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP04_9BURK rbh
uppS; undecaprenyl diphosphate synthase
scnpilot_p_inoc_scaffold_1482_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8801..9634
DNA (834bp) protein (278aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Phosphatidate cytidylyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP05_9BURK rbh
cdsA; phosphatidate cytidylyltransferase
scnpilot_p_inoc_scaffold_1482_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9638..10825
DNA (1188bp) protein (396aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP06_9BURK rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase
scnpilot_p_inoc_scaffold_1482_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10871..12253
DNA (1383bp) protein (461aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Membrane-associated zinc metalloprotease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP07_9BURK rbh
membrane-associated zinc metalloprotease
scnpilot_p_inoc_scaffold_1482_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12318..14588
DNA (2271bp) protein (757aa)
Outer membrane protein assembly factor BamA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP08_9BURK rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
outer membrane protein assembly complex, YaeT protein
scnpilot_p_inoc_scaffold_1482_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..15118
DNA (531bp) protein (177aa)
Outer membrane chaperone Skp n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP09_9BURK rbh
Outer membrane chaperone Skp {ECO:0000313|EMBL:EIK90949.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
skp; outer membrane protein
scnpilot_p_inoc_scaffold_1482_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15127..16179
DNA (1053bp) protein (351aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP10_9BURK rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
scnpilot_p_inoc_scaffold_1482_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16179..16616
DNA (438bp) protein (146aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP11_9BURK
scnpilot_p_inoc_scaffold_1482_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16695..17489
DNA (795bp) protein (265aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP12_9BURK rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
scnpilot_p_inoc_scaffold_1482_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17503..18648
DNA (1146bp) protein (382aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=795665 species="Ba
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP13_9BURK rbh
scnpilot_p_inoc_scaffold_1482_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18620..19306
DNA (687bp) protein (229aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP14_9BURK rbh
scnpilot_p_inoc_scaffold_1482_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19303..20091
DNA (789bp) protein (263aa)
tRNA/rRNA methyltransferase (Spou) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP15_9BURK rbh
tRNA/rRNA methyltransferase (Spou) {ECO:0000313|EMBL:EIK90955.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydroge
tRNA/rRNA methyltransferase SpoU
scnpilot_p_inoc_scaffold_1482_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20230..21468
DNA (1239bp) protein (413aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoyl-phosphate synthetase subunit A CarA (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP16_9BURK rbh
scnpilot_p_inoc_scaffold_1482_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21479..21841
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP17_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90957.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1482_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21859..23706
DNA (1848bp) protein (616aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; B
Carbamoyl-phosphate synthase large chain n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP18_9BURK
carbamoyl-phosphate synthase large subunit
Displaying 24 items

View Taxonomy