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scnpilot_p_inoc_scaffold_2023

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2023_1
unknown

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2023_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412..1707)
DNA (1296bp) protein (432aa)
Large permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNP6_9BURK rbh
Large permease {ECO:0000313|EMBL:EIK90836.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dctQ; large permease
scnpilot_p_inoc_scaffold_2023_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1700..2203)
DNA (504bp) protein (168aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNP7_9BURK rbh
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EIK90837.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenopha
dctM; small permease
scnpilot_p_inoc_scaffold_2023_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2314..3279)
DNA (966bp) protein (322aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNP8_9BURK rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EIK90838.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source
TRAP dicarboxylate transporter subunit DctP
scnpilot_p_inoc_scaffold_2023_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3371..4342
DNA (972bp) protein (324aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNP9_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK90839.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_2023_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4442..5281
DNA (840bp) protein (280aa)
UPF0317 protein Q5W_2238 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ0_9BURK rbh
UPF0317 protein Q5W_2238 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
hypothetical protein
scnpilot_p_inoc_scaffold_2023_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5278..6246
DNA (969bp) protein (323aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ1_9BURK rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EIK90841.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source
TRAP dicarboxylate transporter subunit DctP
scnpilot_p_inoc_scaffold_2023_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6346..6852
DNA (507bp) protein (169aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ2_9BURK rbh
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EIK90842.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenopha
dctM; small permease
scnpilot_p_inoc_scaffold_2023_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..8173
DNA (1299bp) protein (433aa)
Large permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ3_9BURK rbh
Large permease {ECO:0000313|EMBL:EIK90843.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2023_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8277..11897
DNA (3621bp) protein (1207aa)
5-oxoprolinase {ECO:0000313|EMBL:EIK90844.1}; EC=3.5.2.9 {ECO:0000313|EMBL:EIK90844.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenop
5-oxoprolinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ4_9BURK rbh
5-oxoprolinase rbh
scnpilot_p_inoc_scaffold_2023_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11894..13039)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ5_9BURK rbh
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="
hypothetical protein
scnpilot_p_inoc_scaffold_2023_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13029..13310)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90846.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
uncharacterized integral membrane protein
scnpilot_p_inoc_scaffold_2023_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13366..13689)
DNA (324bp) protein (108aa)
Integration host factor subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ7_9BURK
Integration host factor subunit beta {ECO:0000313|EMBL:EIK90847.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydro
integration host factor subunit beta
scnpilot_p_inoc_scaffold_2023_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13700..14941)
DNA (1242bp) protein (414aa)
30S ribosomal protein S1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ8_9BURK
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
rpsA; ribosomal protein S1
Displaying 14 items

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