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scnpilot_p_inoc_scaffold_2114

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2114_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..785)
DNA (783bp) protein (261aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
Ketol-acid reductoisomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM3_9BURK
scnpilot_p_inoc_scaffold_2114_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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1460..1714
DNA (255bp) protein (85aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
scnpilot_p_inoc_scaffold_2114_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1725..2717)
DNA (993bp) protein (331aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:EIK90815.1}; EC=1.2.4.- {ECO:0000313|EMBL:EIK90815.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM5_9BURK rbh
pdhA; pyruvate dehydrogenase E1 component subunit alpha
scnpilot_p_inoc_scaffold_2114_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2737..4617)
DNA (1881bp) protein (627aa)
TRAP C4-dicarboxylate transport system permease DctM n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM6_9BURK rbh
TRAP C4-dicarboxylate transport system permease DctM {ECO:0000313|EMBL:EIK90816.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
TRAP C4-dicarboxylate transport system permease DctM
scnpilot_p_inoc_scaffold_2114_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4619..5635)
DNA (1017bp) protein (339aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component (DctP-like) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM7_9BURK rbh
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component (DctP-like) {ECO:0000313|EMBL:EIK90817.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
putative TRAP-type C4-dicarboxylate transport system, periplasmic component, DctP-like protein
scnpilot_p_inoc_scaffold_2114_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5683..6495)
DNA (813bp) protein (271aa)
Putative uncharacterized short-chain type dehydrogenase/reductase y4vI-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM8_9BURK rbh
Putative uncharacterized short-chain type dehydrogenase/reductase y4vI-like protein {ECO:0000313|EMBL:EIK90818.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_2114_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6535..7464
DNA (930bp) protein (310aa)
IclR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM9_9BURK rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:EIK90819.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_2114_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7455..8021)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNN1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90821.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2114_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8185..8448
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNN2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90822.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2114_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8445..9236
DNA (792bp) protein (264aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNN3_9BURK rbh
methionine aminopeptidase, type I
scnpilot_p_inoc_scaffold_2114_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9283..10503
DNA (1221bp) protein (407aa)
Tetratricopeptide n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNN4_9BURK rbh
Tetratricopeptide {ECO:0000313|EMBL:EIK90824.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;
hypothetical protein
scnpilot_p_inoc_scaffold_2114_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10549..11205
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNN5_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK90825.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2114_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11220..11972
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNN6_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK90826.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2114_14
unknown

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11951..12076
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2114_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12059..12292)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UQ73_9MICC
Uncharacterized protein {ECO:0000313|EMBL:CDM65956.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2114_16
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12498..13727
DNA (1230bp) protein (410aa)
Putative urea ABC transporter, substrate-binding protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XJ04_9BURK
Putative urea ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EFF73121.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobact
putative ABC transporter, branched-chain amino acid-binding protein
scnpilot_p_inoc_scaffold_2114_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13727..14590
DNA (864bp) protein (288aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLE3_VARPD rbh
branched-chain amino acid ABC transporter, permease protein
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGU53692.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo
scnpilot_p_inoc_scaffold_2114_18
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14587..14955
DNA (369bp) protein (123aa)
Urea or short-chain amide ABC transporter n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUH7_TISMK
Urea ABC transporter {ECO:0000313|EMBL:KDB02791.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp.
urea or short-chain amide ABC transporter
Displaying 18 items

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