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scnpilot_p_inoc_scaffold_2479

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2479_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..306
-----------------
DNA (306bp)
protein (102aa)
ferredoxin n=1 Tax=Comamonas sp. B-9 RepID=UPI000395C597
Uncharacterized protein {ECO:0000313|EMBL:EWS63560.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
ferredoxin
scnpilot_p_inoc_scaffold_2479_2
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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303..584
-----------------
DNA (282bp)
protein (94aa)
ferredoxin n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BF0A8
Ferredoxin {ECO:0000313|EMBL:EWS63559.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
ferredoxin
scnpilot_p_inoc_scaffold_2479_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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590..1345
-----------------
DNA (756bp)
protein (252aa)
Putative sulfite exporter, TauE/SafE family n=1 Tax=Variovorax paradoxus B4 RepID=T1XM24_VARPD
putative sulfite exporter, TauE/SafE family
Putative sulfite exporter, TauE/SafE family {ECO:0000313|EMBL:AGU53359.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V
scnpilot_p_inoc_scaffold_2479_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1359..2279
-----------------
DNA (921bp)
protein (307aa)
Putative ornithine cyclodeaminase n=1 Tax=Variovorax paradoxus B4 RepID=T1XL87_VARPD rbh
putative ornithine cyclodeaminase
Putative ornithine cyclodeaminase {ECO:0000313|EMBL:AGU53358.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
scnpilot_p_inoc_scaffold_2479_5
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2380..3033)
-----------------
DNA (654bp)
protein (218aa)
Transcriptional regulator, GntR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0B5_LEPCP rbh
GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACB36594.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (s
scnpilot_p_inoc_scaffold_2479_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3226..4257)
-----------------
DNA (1032bp)
protein (344aa)
Outer membrane protein (Porin) n=1 Tax=Polaromonas sp. CF318 RepID=J3CT27_9BURK rbh
Outer membrane protein (Porin) {ECO:0000313|EMBL:EJL77944.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" so
porin
scnpilot_p_inoc_scaffold_2479_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4296..5825)
-----------------
DNA (1530bp)
protein (510aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0C6_LEPCP rbh
hypothetical protein rbh
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ACB36605.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix ch
scnpilot_p_inoc_scaffold_2479_8
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6307..7788
-----------------
DNA (1482bp)
protein (494aa)
Gamma-glutamyltranspeptidase (EC:2.3.2.2)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22939.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AJG22939.1};; TaxID=68895 species="Bacteria; Proteobacteria; Beta
gamma-glutamyltransferase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003696735 rbh
scnpilot_p_inoc_scaffold_2479_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7824..8444
-----------------
DNA (621bp)
protein (207aa)
glutathione S-transferase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003649604
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ACB36607.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain
scnpilot_p_inoc_scaffold_2479_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8452..10044)
-----------------
DNA (1593bp)
protein (531aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJ78_METPP rbh
mcp; methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABM95617.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium pe
scnpilot_p_inoc_scaffold_2479_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10301..11746)
-----------------
DNA (1446bp)
protein (482aa)
Phosphonoacetaldehyde dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUT6_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31742.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
phosphonoacetaldehyde dehydrogenase
scnpilot_p_inoc_scaffold_2479_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11743..12717)
-----------------
DNA (975bp)
protein (325aa)
Phosphonate metabolism-associated iron-containing alcohol dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUT5_VARPE rbh
phosphonate metabolism-associated iron-containing alcohol dehydrogenase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_2479_13
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12932..13711)
-----------------
DNA (780bp)
protein (260aa)
PhnA protein {ECO:0000313|EMBL:KIP15551.1}; EC=3.11.1.2 {ECO:0000313|EMBL:KIP15551.1};; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkhold
phnA; phosphonoacetate hydrolase (EC:3.11.1.2)
phosphonoacetate hydrolase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4BE7
Displaying 13 items

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