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scnpilot_p_inoc_scaffold_1701_8

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 11238..12212

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 324.0
  • Bit_score: 596
  • Evalue 2.40e-167
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 324.0
  • Bit_score: 596
  • Evalue 1.70e-167
  • rbh
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 313.0
  • Bit_score: 463
  • Evalue 3.70e-128

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAAAGCCCCGATAGACACCCCGCCCGCCGTCCGCCATCTCACCGTCGACGAGGAATCCGACGGCCAGCGGCTGGACAACTTCCTCATGCGCCACCTCAAGGGCGTGCCCAAGACCCACATCTACCGGGTCATCCGTTCCGGCGAGGTGCGCCGCAACAAGGCGCGCACCAGCGCCGACGAGCGCGTGGCGGCCGGCGACGTGCTGCGCATCCCGCCCATTCGGCTGTCCGCGCGCATCGAGGAAAAGGCCGAACGGCCGGCCCCGGCGCGCGAATTCCCGGTGGTGCACGAAGACGAGGGATTGCTCGCGATCGACAAGCCGGCGGGGGTGGCCGTGCACGGCGGCAGCGGCGTCAGTTTCGGCGTCATCGAGCAATTGCGACAATCGCGGCCGACCGCCCGTCTGCTCGAATTGGTGCACCGGCTGGACCGCGAAACCAGCGGTCTGTTGCTCATTGCGAAAAAGAAGAGCGTGCTGAAGGCCTTGCAAGACCAGTTTCGCGAACGGGAAACCGGCAAGACCTATCTGGCACTGGTGCTGGGCGATTGGCCGGCGGCGCGCAAGGTGATCGACGTGCCGCTGCACAAGTACCTGCTGGCCGACGGCGAGCGGCGCGTGCGCGTGACCTCGGCCGACGATCCCGATGGCATGCGGGCGATCACTCTCGTTAAAGTGGCGCGCCGCTGGGCTTCCTCGCCCGGCGGGGGCGGGCCGCTGAGCCTGCTGGAGGTGACCATCAAGACCGGGCGCACGCACCAGATCCGCGTGCACCTGGCGAGCGCCGGCCACCCGATCGCCGGCGACGACAAATACGGCGATTTCGAACGCAACCGGGAATTGGCGCGGCATGGCCTCAAACGCATGTTCCTGCACGCCTGGCGCCTGCGCCTGACCCATCCGCAAAGTCAATCTCCTTTGCAATTGCAAACGGAATTGCCGAACGAACTGCAAGGCTTCGTCGATTCGCTGTGA
PROTEIN sequence
Length: 325
MKAPIDTPPAVRHLTVDEESDGQRLDNFLMRHLKGVPKTHIYRVIRSGEVRRNKARTSADERVAAGDVLRIPPIRLSARIEEKAERPAPAREFPVVHEDEGLLAIDKPAGVAVHGGSGVSFGVIEQLRQSRPTARLLELVHRLDRETSGLLLIAKKKSVLKALQDQFRERETGKTYLALVLGDWPAARKVIDVPLHKYLLADGERRVRVTSADDPDGMRAITLVKVARRWASSPGGGGPLSLLEVTIKTGRTHQIRVHLASAGHPIAGDDKYGDFERNRELARHGLKRMFLHAWRLRLTHPQSQSPLQLQTELPNELQGFVDSL*