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scnpilot_p_inoc_scaffold_1701

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1701_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..311)
DNA (309bp) protein (103aa)
PHP domain-containing protein {ECO:0000313|EMBL:EIK90523.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIK90523.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
PHP domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT3_9BURK
predicted metal-dependent phosphoesterase PHP family
scnpilot_p_inoc_scaffold_1701_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(354..3227)
DNA (2874bp) protein (958aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT4_9BURK rbh
scnpilot_p_inoc_scaffold_1701_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3376..4320
DNA (945bp) protein (315aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT5_9BURK rbh
scnpilot_p_inoc_scaffold_1701_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4325..5152
DNA (828bp) protein (276aa)
Uroporphyrinogen III synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT6_9BURK rbh
Uroporphyrinogen III synthase {ECO:0000313|EMBL:EIK90526.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
uroporphyrinogen III synthase
scnpilot_p_inoc_scaffold_1701_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5149..6306
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK90527.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hemX domain-containing protein
scnpilot_p_inoc_scaffold_1701_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6306..7634
DNA (1329bp) protein (443aa)
Putative porphyrin biosynthesis-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT8_9BURK rbh
Putative porphyrin biosynthesis-like protein {ECO:0000313|EMBL:EIK90528.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sourc
HemY domain-containing protein
scnpilot_p_inoc_scaffold_1701_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7749..10679)
DNA (2931bp) protein (977aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=795665 species="Bacteria; Proteobacteria; Bet
Ribonuclease E n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMT9_9BURK rbh
ribonuclease
scnpilot_p_inoc_scaffold_1701_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11238..12212
DNA (975bp) protein (325aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU0_9BURK rbh
RluA family pseudouridine synthase
scnpilot_p_inoc_scaffold_1701_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12285..12593
DNA (309bp) protein (103aa)
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU1_9BURK
Histone family protein nucleoid-structuring protein H-NS {ECO:0000313|EMBL:EIK90531.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenoph
DNA-binding protein H-NS
scnpilot_p_inoc_scaffold_1701_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12709..13476
DNA (768bp) protein (256aa)
Metallophosphoesterase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCK2_ACIET
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACM32002.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (stra
scnpilot_p_inoc_scaffold_1701_11
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13542..14240
DNA (699bp) protein (233aa)
Putative ECF-family RNA polymerase sigma factor n=4 Tax=Bordetella RepID=K4QEG6_BORBO rbh
RNA polymerase sigma factor rbh
Putative ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAE37684.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source
scnpilot_p_inoc_scaffold_1701_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14343..14912
DNA (570bp) protein (190aa)
ferritin n=1 Tax=Variovorax paradoxus RepID=UPI000368DD6A rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS22941.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
scnpilot_p_inoc_scaffold_1701_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14909..15385
DNA (477bp) protein (159aa)
Cytochrome c2 n=1 Tax=Variovorax sp. CF313 RepID=J2T5W4_9BURK
Cytochrome c2 {ECO:0000313|EMBL:EJL73442.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cytochrome c class I
scnpilot_p_inoc_scaffold_1701_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15457..15951
DNA (495bp) protein (165aa)
Phosphotyrosine protein phosphatase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU2_9BURK
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EIK90532.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_1701_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15939..16916)
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIK90533.1}; EC=5.1.3.- {ECO:0000313|EMBL:EIK90533.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
NAD-dependent epimerase/dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU3_9BURK rbh
NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_1701_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16991..17497)
DNA (507bp) protein (169aa)
AMP-dependent synthetase and ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU4_9BURK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIK90534.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
AMP-dependent synthetase and ligase
Displaying 16 items

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